Gene Hneap_1910 details

Gene Information

• Locus tag: Hneap_1910
• ID: 8535068
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 2043235
• End bp: 2045103
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646384291
• Product: glycosyl transferase family 2
• Protein accession: YP_003263779
• Protein GI: 261856496
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00799183
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGTAA ATACTGGGAG TTGTTCGCGG GCCGAGCACT ATTCGGATGC CTCCCCCAGA 
GCCCTGTTTG CAGTGAGTTC GCTGGGGCTG GGACATGCCA CCCGCAGCCT CGTTTTAATC 
CATGCGTTTC TGGCCGATGG CTACCGGGTT ACGGTTATTT CAACGGGCAA TGCGTTGGCC 
TTCATGCGCC TGGAGCTGGC CGATCACCCC GCTGTCGAAT GGCAGGATTG GCCTGATTAT 
CCACCGCTGG AACGCGGGAC TGGTTGGCGG TTCTACGCTT ATCTTGCGCT TGATCTGTTC 
ACCACTTGGC GACGAATCCG CGAAGAACAC CATCGGTTTG AATCCATTGC CTGTGATTAT 
GATTTTGTAT TCAGCGACGG GCGTTACGGC ATGTACAGTC GCTGGGTTCC CTCATTCATT 
CTGTCTCATC AAATTGCCTT CATTCCGCCC AAGGGGTTGC AGGAAGTCAG CTGGATGAGC 
GATCACCTCA ACGTGGCCGC GCTCAAGCAG TTCGACCGGA TTTTTATTCC GGATTTCCCC 
TGCCCGAGCC TGAATCTAGC CGGGAATCTT TCACATACGC CCGTTTTGCA GAACACCCGC 
CGTGAATATG TCGGGATTCT GTCGTCCTAT CCGCATCAGG AGCTTGAGCA GGATATCGAC 
TACCTGTTCG TGATCAGCGG CTATCTGCAC GAGCACAAGG GGGCGTTTGT CCGTGATCTG 
CTTGAGCAGG CGCAAGCTTT GCCCGGCAAG AAGGTTTTTG TCCTTGGGGA TGCGAACGCT 
GATCCGGCAC AGTATCGGGA CGCACTCTCT GACGATCTCG AAGTGCATCC GCTGGCGACG 
GGTGATCTAA GGCAGGAATT GTTCGGTCGT GCCAAATGCA TTATCTCTCG AGCCGGGTAC 
ACCACGGTGA TGGATCTGGT CGAGCATGAT AAGCGCGCGC TTCTTATTCC AACGCCGAAT 
CAAACGGAGC AGGAATACTT GGGCTACTAC CTCGGTAGTC TTAAATATTT CGTCAGCCGG 
AATCAGTCCG AAGCATTCGA TCTTGCCGCC GCTTTGGCGC AAACAGAAGA CACGCGGCTC 
TTTGAGGCAC CCTGGCGGAC GCAGGAAGCG GTGCGCCGCA TACAGTCATC AATGAGCGAT 
GCGCTCCACA AGAACTTTTT CTCGGTGATA GTGCCCGCAC ATAACGAGGC GGCGGTACTG 
GCGGAAACGT TGGACAGTCT CCTTGCACAA AGCTATCCAG CAAATCGAAT GGAAATCATC 
ATCGTGGAAA ATGGCTCAAC CGATGAAACC TGGGCGATTG CTGAACGGTA TGCGGCGCTA 
TCTGACGGCA ACCTGTCGAT TCGTGCTCTG CAAAGCGAGA AGGGCGTTTC CAAGGCCAAG 
AATGTGGGCT TGGCGGCCAT GAGTGTGCAT TCTGATTGGG TAATCTTTTG TGATGCCGAC 
ACGCAGTTGG CACCCAAAGC CTTGCGTCAG TTCAACCGCT GGATCAATCA GCATGGCTCC 
GAGAGTCTCG CAGTGGGAAC AACGCGTGTA CGACCCCTGA GCGTTAATCG TGTGTATGTG 
CGGTTGTGGT TCAGGGCCTA TGACTTGATT CATCGACTGA CGCGCAGCTC TTACTCCATA 
CAGTTGGCGC GTTCGCCAAT TGCGCGCGGG ATCGGTTTTC GTCCGGAATT GAGTTTTGCA 
GAAGATCTGA CATTCATCAG TGAGTGTCGT CGCTATGGCC GGTTTTTCTA TATTCCCAGC 
GATCAGGTGG CGACATCGAC CCGGCGATTT GAAGCCCAAG GCTATCTGAA GCAAAGCCTG 
AAATGGTTGT TCGAGGCGCT GATGCCCATG CGGATGAAGC GGAAACGAGG ATACGATGTC 
ATTCGCTGA 

 

Protein sequence

MNVNTGSCSR AEHYSDASPR ALFAVSSLGL GHATRSLVLI HAFLADGYRV TVISTGNALA 
FMRLELADHP AVEWQDWPDY PPLERGTGWR FYAYLALDLF TTWRRIREEH HRFESIACDY 
DFVFSDGRYG MYSRWVPSFI LSHQIAFIPP KGLQEVSWMS DHLNVAALKQ FDRIFIPDFP 
CPSLNLAGNL SHTPVLQNTR REYVGILSSY PHQELEQDID YLFVISGYLH EHKGAFVRDL 
LEQAQALPGK KVFVLGDANA DPAQYRDALS DDLEVHPLAT GDLRQELFGR AKCIISRAGY 
TTVMDLVEHD KRALLIPTPN QTEQEYLGYY LGSLKYFVSR NQSEAFDLAA ALAQTEDTRL 
FEAPWRTQEA VRRIQSSMSD ALHKNFFSVI VPAHNEAAVL AETLDSLLAQ SYPANRMEII 
IVENGSTDET WAIAERYAAL SDGNLSIRAL QSEKGVSKAK NVGLAAMSVH SDWVIFCDAD 
TQLAPKALRQ FNRWINQHGS ESLAVGTTRV RPLSVNRVYV RLWFRAYDLI HRLTRSSYSI 
QLARSPIARG IGFRPELSFA EDLTFISECR RYGRFFYIPS DQVATSTRRF EAQGYLKQSL 
KWLFEALMPM RMKRKRGYDV IR