| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1902 |
|---|
| Symbol | |
|---|
| ID | 8535060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2036377 |
|---|
| End bp | 2038077 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 646384283 |
|---|
| Product | acetolactate synthase, large subunit, biosynthetic type |
|---|
| Protein accession | YP_003263771 |
|---|
| Protein GI | 261856488 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000354639 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAATTGT CCGGTGGTCA AATCCTGGTG GAATGCTTGA AAGCTGAAGG GGTAGAGGCC
GTGTTCGGCT ATCCCGGTGG CGCCGTTCTA CACATTTATG ATGCTTTGTT CCAGCAGGAG
CAGGTTCAAC ATATTCTGGT TCGTCATGAG CAGGGTGCCG TGCATATGGC AGATGGCTAT
GCGCGTGCCA CCGGCAAACC CGGTGTCGTA CTGGTGACGT CCGGACCCGG TGCGACCAAT
GCCGTCACCG GTATTGCGAC AGCGCACATG GATTCGATTC CACTGGTGAT CATCACTGGG
CAGGTACCAA CCAGCCTCAT CGGCAATGAT GCGTTTCAGG AAGTCGATAG CGTCGGCATT
ACACGCCCTT GCGTCAAACA CAACTTTTTG GTCAAGGATG TCCGCGATTT GGCCGAGACG
ATGAAAAAGG CCTTTTATAT TGCCACGACC GGACGGCCAG GGCCGGTTGT AGTGGATATT
CCCAAGGATG TGACCGACCC CAGAGTGCTG ATACCGTTCG AATATCCCCA ATCTGTTTCT
TTGCGTTCCT ATCACCCGAC GGTGAAAGGC CATACCGGTC AGATTCGCAA GGCGATCGAC
CTGATTGTCA ACGCCGAACG GCCGATGATC TATTCCGGTG GCGGCGTCGT AATCGGGCGT
GCGGCAGAGC AGTTGACCCG GTTTGCTCGC CTGCTCAATT ATCCGATCAC GAATACCTTG
ATGGGATTGG GCGCGTACCC GGCAAGTGAC CGTCAGTTCC TTGGCATGCT GGGTATGCAC
GGCACCTATG AAGCGAACAT GGGAATGCAT CACTGCGACG TGCTCATCGC CATCGGCGCG
CGCTTCGATG ATCGGGTGAC GGGCAATCTC GCCAAGTTTT GTCCGACCGC CAAGATCGTG
CACATCGATA TCGATCCGGC ATCTATTTCC AAGAATGTGG TTGTAGACGT GCCAATTGTC
GGTTCGGTCA AGTCCGTTCT CGAAGAAATG CTGCCTTTGA TCGAAGACGC GGGTGGTGCC
AAGCAGAAAG ATGCGATTGC CGCCTGGTGG TCGCAAATCG AGCAGTGGCG GGATATGCGT
TGCCTGGACT ACAAGACCAA CGGTGAGGTG ATCAAGCCTC AGTATGTGGT GCAGAAAGTC
TGGGAAATCA CCAAGGGAGA CGCGTTCGTG GCTTCCGACG TAGGGCAGCA TCAGATGTGG
GCCGCCCAGT ACTATGGTTT CGACAAGCCG AACCGTTGGA TAAACTCCGG TGGTTTGGGC
ACGATGGGTT TTGGTTTGCC GGCGGCACTG GGGGCCAAGT TTGCATTCCC TGACGAAGAA
GTCGTTTGTG TGACGGGCGA AGGCAGTATC CAGATGTGTA CGCAGGAGTT GTCCACCGCA
TTGCAGTACC ATCTGCCCAT CAAGGTCGTG AGCCTCAACA ACCGCTATCT TGGCATGGTC
CGTCAGTGGC AGGAGTTCTT CTACTCCGGC CGTTATGCCA TGAGTTACAT GGAAGCCCTG
CCGGATTTCG TCAAACTGGC GGAGTCTTAT GGTCATGTAG GTATGCGGAT CGAAAAGGCA
TCCGACGTTG AAGGCGCGTT GCGCGAAGCG TTCGCCATGC GTGATCGTCT GGTGTTTATG
GATTTCCAGA CCGACCCGAC CGAGAACGTT TACCCGATGG TGCCTGCCGG TGCCGGTTTG
AATGAAATGA TTCTGGTATA A
|
|---|
| Protein sequence | MELSGGQILV ECLKAEGVEA VFGYPGGAVL HIYDALFQQE QVQHILVRHE QGAVHMADGY
ARATGKPGVV LVTSGPGATN AVTGIATAHM DSIPLVIITG QVPTSLIGND AFQEVDSVGI
TRPCVKHNFL VKDVRDLAET MKKAFYIATT GRPGPVVVDI PKDVTDPRVL IPFEYPQSVS
LRSYHPTVKG HTGQIRKAID LIVNAERPMI YSGGGVVIGR AAEQLTRFAR LLNYPITNTL
MGLGAYPASD RQFLGMLGMH GTYEANMGMH HCDVLIAIGA RFDDRVTGNL AKFCPTAKIV
HIDIDPASIS KNVVVDVPIV GSVKSVLEEM LPLIEDAGGA KQKDAIAAWW SQIEQWRDMR
CLDYKTNGEV IKPQYVVQKV WEITKGDAFV ASDVGQHQMW AAQYYGFDKP NRWINSGGLG
TMGFGLPAAL GAKFAFPDEE VVCVTGEGSI QMCTQELSTA LQYHLPIKVV SLNNRYLGMV
RQWQEFFYSG RYAMSYMEAL PDFVKLAESY GHVGMRIEKA SDVEGALREA FAMRDRLVFM
DFQTDPTENV YPMVPAGAGL NEMILV
|
|---|
| |