Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1889 |
Symbol | |
ID | 8535047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2024443 |
End bp | 2025213 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646384270 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003263758 |
Protein GI | 261856475 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTG CAAATAATAT AGGCCAAAAG CAAGTTATCT GGATTGTTGG TGGAAGCAGC GGCATTGGCC TCGCCCTGGC GGAAGGGTTA CTTCAACAGG GCTTTTGTGT GGTGGTGTCG GCGCGACGAA TCGAAGCGCT CCAAACACTT GCGGAGCGTT TCCCAGAAAC CATTCAGTGT GTTCTGGTTG ATGTGACCGA GCCATCAACA CTCAAAGACG GTTTATCAGC AATCTTGGCG CATTGGGGGC AGCTTGATCG CGTCATCTTG AACGCAGCCG ACTACGCGCC CATGAGCCTT GATGATTTCG ATCCGGCCTT GTTTGAACGC TTGATGCGCA TCAACTTCAT GGGCGTGATT CACGGTATCG ACGCGGTGCG CGGCCATTTT TTGGCTCAAG GTGCCGGCGA GATCATCATT ACGGCGAGCG TCGCCGGGTT TCGCGGGTTG CCCAATGCAG CGCCTTATGG CGCAACTAAG GCTGCTTTGA TCAATATGGC CGAGTCGCTT GCGCCGGAAT TTGCCCAGCG CGGTGTTGCC CTTCGCGTGA TTAACCCCGG GTTTGTGCGC ACGCCGCTCA CCGAAAAAAA CGATTTCGAG ATGCCCGGTA TCATCGAGCC AGAAGAGGCC GCGCGCCTGA TTATTCGCAA ATTGAATCGT TCGGGTTTTG AGCTGTTAGT TCCCACCGGT TTTGGTTTGG TGATGAAACT AATCCGCATC TTGCCCTATC GCCTCTTTTT TGCGCTGACA CGCAGGATGT TGAAAAAATG A
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Protein sequence | MKAANNIGQK QVIWIVGGSS GIGLALAEGL LQQGFCVVVS ARRIEALQTL AERFPETIQC VLVDVTEPST LKDGLSAILA HWGQLDRVIL NAADYAPMSL DDFDPALFER LMRINFMGVI HGIDAVRGHF LAQGAGEIII TASVAGFRGL PNAAPYGATK AALINMAESL APEFAQRGVA LRVINPGFVR TPLTEKNDFE MPGIIEPEEA ARLIIRKLNR SGFELLVPTG FGLVMKLIRI LPYRLFFALT RRMLKK
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