Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1857 |
Symbol | |
ID | 8535015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1991957 |
End bp | 1992658 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646384238 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_003263726 |
Protein GI | 261856443 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00785835 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGC AAGATACCAT TATTACGGCA CGGAGCCCCC GCATCATCGA CAAGATACTT GCGCGACATT TTGAGGAACG TGGGCATTTC TGGTTGATCC CTGAAGGGGA TGAAGATTTT CAGATTGCGG TTCAGATGGT CTCTAATGAT CCGGAAAACC GCCGTTTTTT AATTGACCAG CCTAAGGAAG TCCCCTTGAG GCACCTCAAG GCTTCCGGCC GGATTCGGGT GCAGGCGGTT ATCGACCAGT TGGTTTCATG GTTTTATGTC AATGATCTTA AAGAGAAGAT TGAGGGCACC GACCGGTACT TTGAGATTCC CTACCCTGCT CAAATAGATC GTTTGCAACG CCGGAATGTG TTTCGAGTGC ATATTCCACC TGATGTCATT GGTGTGGTGG AGTTTTTCCA GCCGACAACA AGTACCCTTT GGGTCGGGCG TTTAGATGAT CTTTCTGCCG GCGGTTGTGC AATCGCACTG CGTCCCGATC AGGCTATCGG TTTGGATTTA GGGGTGCAAT TGTCCCCGGT GAAATTGTCC ATTGATGGTT TTGCCGATCT GTCGGTGAAT CTCGTGATTC GCAATCAGCG CATTGTTTCC CCGGGCGAGT GGATCTTTGG GGCCGAGTTT GTCGATCTTG GCCCGCTTGA GTCGCAGCAG TTGGATCGGG TCGTCATGCG GTTACAGCGA TACTTGATTT GA
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Protein sequence | MSQQDTIITA RSPRIIDKIL ARHFEERGHF WLIPEGDEDF QIAVQMVSND PENRRFLIDQ PKEVPLRHLK ASGRIRVQAV IDQLVSWFYV NDLKEKIEGT DRYFEIPYPA QIDRLQRRNV FRVHIPPDVI GVVEFFQPTT STLWVGRLDD LSAGGCAIAL RPDQAIGLDL GVQLSPVKLS IDGFADLSVN LVIRNQRIVS PGEWIFGAEF VDLGPLESQQ LDRVVMRLQR YLI
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