Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1845 |
Symbol | |
ID | 8535003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1980417 |
End bp | 1981775 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646384226 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_003263714 |
Protein GI | 261856431 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00111651 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAA TGAATCGTCG TAATTTCCTG AAACTGACTA CCGCGGCAAC CGCAGCGGCC GCAACGTTTG GTGCAGGCTC GGCAGTCGCC AAAGACGCGC CTCATGTCGT TGTGATTGGT GGCGGCGTTG GTGGAGCTAC GTTCGCCAAA TACATGAAAA TGTATTCACC AGAAACCCAC GTCACCATCA TCGAGAAAAA CAAGGAATAC CAGCGACCCT ACGGTTCGAG CGAAGTGATT GTTGGCCGCA TCGGGATGAA CGACATCACC ATTTCCTACG ATGATCTCAA AAACAAACAT GGGGTTAATT TTGTTTTCGA TACCGTCACC GGCGTCGATT ACGACAAACG TGAAGTCAAA ACCGCTGGCG GTACAACCCT TAAATACGAT CGTTTGCTCG TAGCGCCGGG CGTTTCGTTC GATTACAGCC AGATACCCGG CATGGATTCG AACGAGGCAC AATCGAAAAT CGTCCACGGT TGGGATGCAG GCGACCAACT GCTCACACTG CAAAAACAAC TTCAAGCCGT ACCGGTCGAT GGAACGGTCG TGGTCATCCC GCCGCCAAAT CCCTATCGCT GCCCGCCCGG CCCGTACGAA CGTTCCGGCC TGATCGCCCA GTGGTTTATT AATCGCGGCG ATAAGAACGC CAAAGTCATC ATTCTTGACC CAAAAAACGG CTTTACCGTC GATCGCACCA TGTTGCAAGC ATGGAACCGG CTGTATGGTT TTAATCTGCC AGAAAGCTTC AAGGGTTATA CCGCCGAGGA ACGCGCCACA TTCAAAAAAT ACGATACGCA CGGAAAAATC CAGTGGGTTA CCGCCGACGA AGGCGGCCGC GTAGTCAAAA TCGACCCCGC CACGATGACC GTTGAAACCG AAGTGAGTGT ATTCAAGGCC GACATGATCA ATCTGATTCC GCCGCTCAAG GCCGGAAAAA TCGCTCTGGA CATGGGCTTG GCAGATAAAT CCGGCTGGTG CCCCGTCGAT CAAAAAACAT TCGAATCTAC CATCCAGCCG AATGTGCATG TGATCGGGGA TGCCTGCATT GCAGGCCAAA TGCCTAAATC CGGCTACGCG GCCAACAGCC AAGCCAAAGT TGCGGCGCTA CAGATCAAGG CGTTGCTGGC AGGCCAAGAA CCGATTGAGC CGGCATTCCA GAACACCTGT TACGCACTGG CGGGCCGAGA CGACTATGGC ATGTTCGTTG CGGATTTCTT CCGCCTCAAG AACGGCGTCA TCACACGCGA TGACTATCCG CGTTATCTGC CATTCAAAGC AAGTGATGCG CAATACCAAT TGTCGGCGGT TTATCTGCAT GCCTGGATGA AGAGTTTCAC AGAAGACATT TTTTCGTGA
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Protein sequence | MNTMNRRNFL KLTTAATAAA ATFGAGSAVA KDAPHVVVIG GGVGGATFAK YMKMYSPETH VTIIEKNKEY QRPYGSSEVI VGRIGMNDIT ISYDDLKNKH GVNFVFDTVT GVDYDKREVK TAGGTTLKYD RLLVAPGVSF DYSQIPGMDS NEAQSKIVHG WDAGDQLLTL QKQLQAVPVD GTVVVIPPPN PYRCPPGPYE RSGLIAQWFI NRGDKNAKVI ILDPKNGFTV DRTMLQAWNR LYGFNLPESF KGYTAEERAT FKKYDTHGKI QWVTADEGGR VVKIDPATMT VETEVSVFKA DMINLIPPLK AGKIALDMGL ADKSGWCPVD QKTFESTIQP NVHVIGDACI AGQMPKSGYA ANSQAKVAAL QIKALLAGQE PIEPAFQNTC YALAGRDDYG MFVADFFRLK NGVITRDDYP RYLPFKASDA QYQLSAVYLH AWMKSFTEDI FS
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