| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1827 |
|---|
| Symbol | |
|---|
| ID | 8534985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1962602 |
|---|
| End bp | 1963315 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646384208 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_003263696 |
|---|
| Protein GI | 261856413 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAC GCCAAATCGT ATTGGATACC GAAACCACGG GGATGCCCGC TGCCGATGGG
CATCGGTTGG TGGAGATTGG TGCGGTGGAG ATGATCGAGC GACGTGTGAC GGGTAAGACA
TTTCATTGTT ACCTCAACCC CGAGCGGCTG GTGGATGAGG GCGCGTTCAA TGTGCACGGT
TTGAGCGATG CGTTTTTGGC GGATAAGCCG AAATTCGCCG ATGTGGTGGA TGAGTTTCTG
GCGTTTATCG CGGGTGCTGA GCTGATCATT CACAATGCCG AGTTTGACGT GGGGTTTCTC
GATGCGGAGC TTGCCCGGCT CGCCAATGGC GGTCGGTTGG CTGATGTTGC CGGTTCCGTG
ACCGATTCGC TGGCCATTGC GCGCAAAAAA CATCCCGGCC AACGTAATAG CTTGGATGCC
TTGTGCCGCC GATACAGCAT TGATAACAGT GCGCGCACCC TGCATGGCGC GCTGCTGGAT
TCTGAAATCC TGGCTGATGT GTATCTGGCG CTGACCGGCG GGCAAAAAAC GCTGGGTTTT
GACAGCGAGC ACGGGCAGGG TGATGAGCAC AAACAGGCTG CGTCGATTAT TCGTTTGCCC
GCCGATCGGC CGCCGTTGCG CGTGATTACC GCCAACGAGG AAGAGCGCGC TGCCCATGCA
GCATGGTTGG TGACTTTGGG CAAAGAAGGT GAGCCCGCAC CTTGGCCCGC ATGA
|
|---|
| Protein sequence | MTERQIVLDT ETTGMPAADG HRLVEIGAVE MIERRVTGKT FHCYLNPERL VDEGAFNVHG
LSDAFLADKP KFADVVDEFL AFIAGAELII HNAEFDVGFL DAELARLANG GRLADVAGSV
TDSLAIARKK HPGQRNSLDA LCRRYSIDNS ARTLHGALLD SEILADVYLA LTGGQKTLGF
DSEHGQGDEH KQAASIIRLP ADRPPLRVIT ANEEERAAHA AWLVTLGKEG EPAPWPA
|
|---|
| |