| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1802 |
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| Symbol | |
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| ID | 8534960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1936279 |
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| End bp | 1938540 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646384184 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003263672 |
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| Protein GI | 261856389 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.135784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGA TTTTGGGCAC GCGACGGTGG GGGCTATTGG GCCTGATGTT GATGTTTTTT
TTCAGCGTGT TCCCGTCTGT CCATGCATCA ACGCTTCAGG CCATCGAGTC CGCCACGCAG
ACCGAATCGC AGCCTTCCTC CGCCGCGCCG GATTATGCCG CGCTTGCTGC CCTGCTGGCA
GATCCGCAAT CCCGAGCGGT TCTGATCAAA GAATTGCAGC GACTGGCAGC GCAATCCCCG
AATCAATCCA CGGCAAAGGC CAAGGATGCC CAGCAATCCA GTGCCGAGCC CACGCTGGCC
AATGAGATGG CCTTGGATAC CCTGGGTGTC TTTCACGCGC TGGGTGATGC CGGCAAGACG
GCCTGGGTGC AAATCAATCG ATTGCTGCTC GCCGATCCCA GCGCCTGGGA TTGGTCTGCC
GTTAGCAACC ATGCTTGGCG TCTGGCGTTG CTGATTCTGT TCAGCTACGG TGTGTGGCTA
TCGTTCGGGC GGTTGATCCG GCCGGTATTA TTACGACTGG ATCAATGGAC TTCCGCCGCA
CGAGCCAGGC TGCATTTGCT TCGGCTTTCT GTGTCGCTGA CGGCCACAGC TCTGCTGGGT
GTGCTGGTCC TGGGCCTGAT TTATGTGTGC GGAAATCTGC TCTCCGTCTG GTTGGCGGGC
GATCTGGCCT CCGCGCTGCT ACGACAGACG CTGTTTCTGA ATGCATTCAT CCTGATTGAG
TTCATTCGAC TCGTTATTGC GCTGATACTG ACTCCTTCTT TTGACGGGTT GAGCCTGTTT
CCCATCAAGG CCGAGCAGGC GCGATTCTGG ATGCGCCGCA GTTCGCGCCT TATTCTTCTG
CTCGGGTATG GTCTGATGTG GCTGGTGCCC GTGATCAGAG AAAACTGGGG AGGCGATGCT
GCGCAGATCA TGACTTGGTC GCTGGCAGTC ATTGCGCTCG TTTACGCCTT GCAGACTGTG
TTCAGTCAGC GTCATGTTTT ACGCGATTGC CTGACCTCGC TGGCCGCAAG GCAGTCCAGC
GGCATGCTTG CTTGGCTGTT CACGGCGTTG TCCCACACCT GGCATTTATT GGCCGCCCTC
TATATCGGTA TGGTTTTTCT GGTCGGTTTG ACGCGACCCG TTGATGCGCT GCCATTTGTC
GCCCGTGGAA CCGGCTATAC CGTTTTGATC ATTACCGCCG CGATGCTGCT TGCCGCGATC
ATGGTGCAAC TGCTCGGCGG GGAAATTCAC CTCAAGGAAC AGCATCGACA ACGGGTGCCG
TTGCTGGAGC GTCGGCTAAA TATCTATCTG CCCTGGCTGT TGCGGACGAT CCGATTGGTT
ATCTTGGTGA CGTCCATCGC CTTGATCCTC GCTGTGTGGC AAGTCACCAA TGTGTTCAAC
TGGTTGGGCA CCACCGCCGG TCAGCAGTTG CTAAGCACGG CCTTTGATGT GGCGTTCATC
GTCATCGGTA CCGTGATCGT CTGGTTGGTG CTGTCCAGTC TGATCGAGAT GAAACTCAAT
GGCGTCAGCA GTCATATGCC CTCGGCGCGC ATGCAGACCT TGCTCACCTT ATTTCGCAAT
ATCATCGCCA TTGCGTTGCT GGCGATGGCC GTGATGATGG TGCTCTCCGA GATTGGTGTG
AACATCGGCC CCCTGCTCGC CGGTGCCGGT GTCTTGGGCC TTGCCATCGG TTTTGGTGCC
CAGAAGCTGG TGCAGGATGT CATCACCGGC GTGTTCATCC AGCTCGAAAA TGCCATCAAT
ACGGGCGATA CGATTACCGT TGGCGGCATT ACCGGAACCG CCGAGCGCTT GACGATCCGC
TCGGTCGGTT TGCGCGATCT CAACGGCACC TACCACATCG TGCCGTTTTC TGCGGTCGAG
GTGGTCTCCA ACTACATGCG AGGCTACGCC TATCACAAAG CGGAATATGG CATTGCTTAT
CGCGAGAGCA TCGATGAGGC GATCACGTAC CTTGAGGCCG CATTTGAAGA ACTGAAGTCC
GATCCGGCGA TGCGTGGCAA AATTCTTGAG CCGATACACA TTCCGGGCGT CACGGAGCTG
GGCGCGAGCT CCGTGAACAT CCGTGTCATG ATCAAAACGA CGCCGGGTGA TCAGTGGGCC
GTGGGACGCG CTTACAATCG CCTCGTCAAA ATGCATTTTG ATGCGGCGGG TATCGAAATT
CCCTTCCCGC ATACCACCAT TTATTTCGGT GAAGATAAAT CGGGCAAATC GCCGCCGGTC
TATGTTCAGA ATTTGGGCGG CACGCCGGAT TCCGCTGGCT GA
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| Protein sequence | MRLILGTRRW GLLGLMLMFF FSVFPSVHAS TLQAIESATQ TESQPSSAAP DYAALAALLA
DPQSRAVLIK ELQRLAAQSP NQSTAKAKDA QQSSAEPTLA NEMALDTLGV FHALGDAGKT
AWVQINRLLL ADPSAWDWSA VSNHAWRLAL LILFSYGVWL SFGRLIRPVL LRLDQWTSAA
RARLHLLRLS VSLTATALLG VLVLGLIYVC GNLLSVWLAG DLASALLRQT LFLNAFILIE
FIRLVIALIL TPSFDGLSLF PIKAEQARFW MRRSSRLILL LGYGLMWLVP VIRENWGGDA
AQIMTWSLAV IALVYALQTV FSQRHVLRDC LTSLAARQSS GMLAWLFTAL SHTWHLLAAL
YIGMVFLVGL TRPVDALPFV ARGTGYTVLI ITAAMLLAAI MVQLLGGEIH LKEQHRQRVP
LLERRLNIYL PWLLRTIRLV ILVTSIALIL AVWQVTNVFN WLGTTAGQQL LSTAFDVAFI
VIGTVIVWLV LSSLIEMKLN GVSSHMPSAR MQTLLTLFRN IIAIALLAMA VMMVLSEIGV
NIGPLLAGAG VLGLAIGFGA QKLVQDVITG VFIQLENAIN TGDTITVGGI TGTAERLTIR
SVGLRDLNGT YHIVPFSAVE VVSNYMRGYA YHKAEYGIAY RESIDEAITY LEAAFEELKS
DPAMRGKILE PIHIPGVTEL GASSVNIRVM IKTTPGDQWA VGRAYNRLVK MHFDAAGIEI
PFPHTTIYFG EDKSGKSPPV YVQNLGGTPD SAG
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