| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1713 |
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| Symbol | |
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| ID | 8534871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1840051 |
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| End bp | 1841190 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384095 |
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| Product | 23S rRNA (uracil-5-)-methyltransferase RumB |
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| Protein accession | YP_003263583 |
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| Protein GI | 261856300 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTGTG CTTATTTTGA ACGTGGAACC TGTCGTTCCT GTGGCTGGTT GGCCGATCCT
TATGCCGATC AGTTGCAGCG AAAGATGGCG CGCTGTCAAT CAGCCTTGAC GGGTTTGGGT
GGCGTGTGGT TGCCCATTGT CCCCAGCGCC GAAACTGCTT TTCGGAACAA GGCAAAAATG
GTTGTTTGCG GCGATGCATC CTCGCCTTGT CTGGGTATTC TCGATGCCGA CGATGATGGT
ATCGATTTAT CAAATTGCCC GTTGTACCCC ACTGCCATTA CCGAGGCTTT CGAACCGCTC
AAGCAGATGA TCCGTCGATT GGGTATTCCA CCTTATGACG TCAAAAAGCG ACAAGGTGAA
TTGAAATATT TGCTGATTAC GGTGTCCGAA GACGACGATT CACTGATGGT CCGGCTGGTT
TTGCGTTCGG ATATATGGAT CGAGCGTTTG CGGGCAGACT TATCCACATT GACCGCTGAT
TTGCCACACC TAGCCGTGCT TTCGGTCAAT ATTCAGCCCG TGCATCAGGC CATCCTTGAG
GGCGAGCAGG AAGTGATTCT CACGGATCGG GAAACCCTGA CAGTGCATTT GAATGGCTTG
CCGTTTCACC TTCGACCCAA GAGCTTCTTT CAGACAAACA CCCGCGTGGC GGAGCAGTTA
TATGCCACGG CCCGTAGCTG GGTGGCCGAG GTCGCACCTG TACACATGTG GGATTTGTTT
TGCGGTGTCG GCGGTTTTGC ATTGCACTGT GCCGATGTGA TTCCGGGACA GGTCACAGGG
ATTGAAATCA GCGCCGAAGC AATCGCCAGT GCGCAGCAGT CCGCTTTGGA ACTGGGTTTG
AAAAACGTAT CGTTTCATGC GCTCGGAGCC AACGAATTTA TTGATCAGGC GGTAAGCCTG
CCACAGATGC CGGCTTTGGT CGTGGTCAAT CCGCCACGAC GGGGATTGGG TGTCGGTCTG
TGCGCCTTTC TGGATGAATC GGTGGTGCAG ACCGTCATCT ACTCCAGCTG CAATCCCGAG
AGTCTGGCCC GTGATCTCGT TATGATGCCT GGCTTTGAAC TGGTAAAGGC GCAGGTATTC
GATCTGTTTC CACACACGGC ACACAGTGAG GTATTGGCGA TGCTCGTGCG AGTGCGCTGA
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| Protein sequence | MHCAYFERGT CRSCGWLADP YADQLQRKMA RCQSALTGLG GVWLPIVPSA ETAFRNKAKM
VVCGDASSPC LGILDADDDG IDLSNCPLYP TAITEAFEPL KQMIRRLGIP PYDVKKRQGE
LKYLLITVSE DDDSLMVRLV LRSDIWIERL RADLSTLTAD LPHLAVLSVN IQPVHQAILE
GEQEVILTDR ETLTVHLNGL PFHLRPKSFF QTNTRVAEQL YATARSWVAE VAPVHMWDLF
CGVGGFALHC ADVIPGQVTG IEISAEAIAS AQQSALELGL KNVSFHALGA NEFIDQAVSL
PQMPALVVVN PPRRGLGVGL CAFLDESVVQ TVIYSSCNPE SLARDLVMMP GFELVKAQVF
DLFPHTAHSE VLAMLVRVR
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