| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1665 |
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| Symbol | |
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| ID | 8534823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1791951 |
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| End bp | 1792640 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384050 |
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| Product | Conjugal transfer protein |
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| Protein accession | YP_003263538 |
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| Protein GI | 261856255 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAAGC AATCCAAACC CGCCGATGCT CCATCGGCGC ATGAACAGCT CAATCCGTAT
ATTTCCGCGC GTCGGGAATG GAATGAGCGC TATGGCGATT ATGTGTCGCA GGCCAAAAAC
TGGCGCATTG TGGCAGTGTT ATCCGGGATC ACGGCAGTTA TGGCAGTGGC TGGTGTCATC
TATATCGGCG CGCAAAGCAA ATTCATTCCC TATGTGGTGG CGGTCGATCA GCATGGCAGC
GCTGTGGCAG CCGGTATTGC CGACCGGGCT TCAGCCACTG ATCCGCGCGT GATTCGTTCG
CTCATCGGGC GATTCATTAC CGATTTACGC GGGGTGATTT CCGATCAACA GGCCGAGAAG
GCGGCCATTG ATCGGGTGTA TTCCATGCTT CCTTCGGGTG CGGCATCCAC CACCGTTATT
TCGGGTTGGT TCAAAGACCA ATCGCCTTTT TCCCGCTCGG CGACGGAAAC CATTTCAGTT
GATGTTGAGA GCATTCTGCC GATTTCATCC AAATCGTGGC AGGTCGATTT CCGCGAAACC
GCCCGCTCGC CCAATGGCAT GTTGCTCTCT AAAAAGCGCT ACCGCGCCAC GCTGACCACC
CAACTTTCCC CCATCACCAA CGAGCAATTG ATTCGCCTGA ATCCCATTGG GCTGTTTGTG
ACTGATATTT CCATCACCCA AATTCTTTGA
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| Protein sequence | MNKQSKPADA PSAHEQLNPY ISARREWNER YGDYVSQAKN WRIVAVLSGI TAVMAVAGVI
YIGAQSKFIP YVVAVDQHGS AVAAGIADRA SATDPRVIRS LIGRFITDLR GVISDQQAEK
AAIDRVYSML PSGAASTTVI SGWFKDQSPF SRSATETISV DVESILPISS KSWQVDFRET
ARSPNGMLLS KKRYRATLTT QLSPITNEQL IRLNPIGLFV TDISITQIL
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