Gene Hneap_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1603 
Symbol 
ID8534761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand- 
Start bp1745327 
End bp1745968 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID646383992 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003263480 
Protein GI261856197 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG ACCAATCTCA TCAAAAGCGA CGAGGCCGCC CCCCGAAGGC TCGTGACACT 
CTGATAGAAA CCCGTGAGCT GTTATTAAGA GCAGGCCTTG AAGTACTCAC CGAAAAAGGG 
TTTTCAACAA GCGGTATCGA CGAAATACTT AGCAGAGTGG GTGTTCCGAA GGGATCCTTT 
TATCATTACT TCGACAACAA GGAAGCATTT GGCTCGGAAC TTATTGAGCG TTATGCACAA 
TATTTCGCGA CAAAAATAGA ACGTCATTTG CGAAATGAAA TGCTCAGTCC ACTAGATCGG 
TTGAAGGCCT TCATAGAGGA CGCCAGCCTC TCGATGGAGA GGTATGCATA TCGTCGGGGT 
TGCCTTGTTG GGAATTTAGG TCAAGAGGCG GGAGTGCTCC CACAACGCCT TCGAACCCAG 
ATAAAGGATG TCTTTTCGGA CTGGGAAGTC AGACTGTTGC GTTGTTTGGA CGAGGCGAAA 
GCTGATGGTC AGATATCTGT ATCTGCGGAC ACCACTCAGC TAGCGTCCTT CTTCTGGATA 
GGATGGGAGG GAGCTGTGCT TCGAGCAAAG CTGGAACGGT GTGGCGAGCC CCTCAGAATC 
TTTTCTCAAG GTTTTTTTGC AGTGCTAACC CCTGCCACTT AA
 
Protein sequence
MKVDQSHQKR RGRPPKARDT LIETRELLLR AGLEVLTEKG FSTSGIDEIL SRVGVPKGSF 
YHYFDNKEAF GSELIERYAQ YFATKIERHL RNEMLSPLDR LKAFIEDASL SMERYAYRRG 
CLVGNLGQEA GVLPQRLRTQ IKDVFSDWEV RLLRCLDEAK ADGQISVSAD TTQLASFFWI 
GWEGAVLRAK LERCGEPLRI FSQGFFAVLT PAT