| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1597 |
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| Symbol | |
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| ID | 8534755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1738955 |
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| End bp | 1740199 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383986 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_003263474 |
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| Protein GI | 261856191 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.948764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATA AGACCGATTC TAAAGTTTGG CGCAGTGTGA GAGCTGCGAT TCAGGGTCTG
ACACTTTCGT CAGTATTAAT TGCATCTGCC GTTTATGCCG GGCCCCCGAC CGCTGAAGTC
AACACAACAG GTCTTGCAGT GACTGACGAT ACGGTGACCG TAGGTATCCT CCATTCACTG
ACAGGCACCA TGGCAATTAG TGAAACCGGT GCTCAGGAAG CCGAGAAACT GGCCATTGAG
CAGATCAATG CGCAAGGCGG CGTCCTAGGG CGCCAGATCA AATTTATCCA GGAAGATGGC
GCCAGTGACT GGCCTACCTT CGCCGAGAAA GCCAAGAAGT TGTTGGAAGA AAACCATGTG
GCCGCCATTT TTGGTTGCTG GACATCAGCA TCCCGTAAGG CAGTTCTTCC CGTGCTGGAG
CGTGATAACG GCCTGTTGTA TTACCCGACT TTCTACGAAG GTCTGGAGCA GTCCAAGAAT
GTGGTCTATA CGGGCCAGGA GGCGACTCAA CAGGTATTTG CTGGCTTGGA TTGGGTAGCC
AAGAACAAGA ACGCCAAGAC CTTCTATCTG ATCGGTTCTG ACTACATCTG GCCACGTACG
ACGATGAAAC TGGCGCGCAA GTACATTGAA ACTGTATTGC ACGGCAAGGT GGTGGGTGAG
GAATACGCCG CGTTGGGCAG CACCCAGTTC GGTTCAACCA TCAACAAGAT CCGTCTGAAA
AAGCCGGATG TCATCTACGC CGCTGTGGTT GGCGGTTCAA ACGTTGCCTG GTTCAAGCAA
CTCAAAGCGG CCGGTATTAA CGGTAGCAAG CAGACATTGC TGACCTTGTC TGTCACTGAA
GACGAAGCCC AGGGCATCGG TGGCGAAAAC CTCAAAGGCT TCTACTCTGC GATGAAGTAC
TTCCAGTCTC TGGATACACC GGAAAACAAG GCTTTCGTTG CTGCGTTCAA GAAACGCTGG
GGTGCTGATG CGCCGATCGG TGATGTAACT CAGGCTGCGT ATGAGGGCCC GTGGTTATGG
AAGGCTGCTG TCGAGAAAGC GGGTAGCTTC GATACGGACA AGGTTGTGAA GGCTGAAGAA
AGCGGCACGA TAACCTTCAA CGCTCCTGAA GGCATGGTTT ACCTCGAGCC AAACCATCAC
CTGAAGACGC GTCTGCGAAT CGGCGAATGG CGTGACGATG GTCAGGCAGA CATTGTCTAC
ACCTCACCGT ACATCATGCC GAATCCGTTC CCGAAAGGTT ACTGA
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| Protein sequence | MINKTDSKVW RSVRAAIQGL TLSSVLIASA VYAGPPTAEV NTTGLAVTDD TVTVGILHSL
TGTMAISETG AQEAEKLAIE QINAQGGVLG RQIKFIQEDG ASDWPTFAEK AKKLLEENHV
AAIFGCWTSA SRKAVLPVLE RDNGLLYYPT FYEGLEQSKN VVYTGQEATQ QVFAGLDWVA
KNKNAKTFYL IGSDYIWPRT TMKLARKYIE TVLHGKVVGE EYAALGSTQF GSTINKIRLK
KPDVIYAAVV GGSNVAWFKQ LKAAGINGSK QTLLTLSVTE DEAQGIGGEN LKGFYSAMKY
FQSLDTPENK AFVAAFKKRW GADAPIGDVT QAAYEGPWLW KAAVEKAGSF DTDKVVKAEE
SGTITFNAPE GMVYLEPNHH LKTRLRIGEW RDDGQADIVY TSPYIMPNPF PKGY
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