Gene Hneap_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1587 
Symbol 
ID8534745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1727538 
End bp1728416 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID646383976 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003263464 
Protein GI261856181 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.522901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAC ATAAGGATGA GCGCGGCACC ATTCTGTTGG TAGACGATGC GCCGGACAAT 
CTGCGCGTGC TTCACGATGC GCTGCAGCAG CAAGGCTATC GGGTGCTGGT TTCCACCGAT
GGACAAAGCG CACTGGATAG CGTGCAGCTC ATGCCACCCG ATGTCATCAT TCTTGATGCA
CGCATGCCCG GCATCGACGG TTTTGAAACC TGCAAACGGC TAAAAAATGA TCTGACCACT
CGTGATATCC CGGTCATTTT TATGACAGGC CTTAGTGACA CCGAGTACAT CGTTCAGGGT
TTTCAGGCTG GTGGTGTCGA TTACGTAACC AAACCGGTCG TGATAGAAGA GCTATTGGTG
CGCATCACCA CCCATATGCA GCGGGCGCAG CTGGTCACGC ACACCCGCTC TGCAATCGAT
TCAGCCGGTC GAGCTATTCT GGCCTTCGAC TCGGGCTATG CGATTACCTG GGCCACCCCT
TTGGCTCAGC GGTTGGTTCA ATCCGTGGTC GACGCGCGAG ATCAGTTGCC ACCCCCCGTT
CGCCAATGGC TTAAAGACAA GGATGCCGAT CCTTCTTTCC CGCTCTGGCA TCAGGGTGAG
CGCCTGTTGT TTACTCGGAT CGAACCCGGT CTGTTGTCCA TCCAACGCCA TGCGGCACAG
GCTGAACCGG AAGCACTAGC CAGGATATTC CAGCTGACGG CGCGCGAGGC GGAAAGCCTC
TACTGGGTCG CCCTTGGAAA GACCAATAAG GAAATCGGTG AGATCCTGCA GATCAGCCCA
CGCACGGTCA ACAAACACTT GGAGCACGTG TTCGAAAAGC TGGGAGTCGA AACCCGGACG
GCTGCAGCGG CTCTGGTGTT AAGCCGACCC TCTGGCTGA
 
Protein sequence
MNLHKDERGT ILLVDDAPDN LRVLHDALQQ QGYRVLVSTD GQSALDSVQL MPPDVIILDA 
RMPGIDGFET CKRLKNDLTT RDIPVIFMTG LSDTEYIVQG FQAGGVDYVT KPVVIEELLV
RITTHMQRAQ LVTHTRSAID SAGRAILAFD SGYAITWATP LAQRLVQSVV DARDQLPPPV
RQWLKDKDAD PSFPLWHQGE RLLFTRIEPG LLSIQRHAAQ AEPEALARIF QLTAREAESL
YWVALGKTNK EIGEILQISP RTVNKHLEHV FEKLGVETRT AAAALVLSRP SG