Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1587 |
Symbol | |
ID | 8534745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1727538 |
End bp | 1728416 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383976 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003263464 |
Protein GI | 261856181 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.522901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAC ATAAGGATGA GCGCGGCACC ATTCTGTTGG TAGACGATGC GCCGGACAAT CTGCGCGTGC TTCACGATGC GCTGCAGCAG CAAGGCTATC GGGTGCTGGT TTCCACCGAT GGACAAAGCG CACTGGATAG CGTGCAGCTC ATGCCACCCG ATGTCATCAT TCTTGATGCA CGCATGCCCG GCATCGACGG TTTTGAAACC TGCAAACGGC TAAAAAATGA TCTGACCACT CGTGATATCC CGGTCATTTT TATGACAGGC CTTAGTGACA CCGAGTACAT CGTTCAGGGT TTTCAGGCTG GTGGTGTCGA TTACGTAACC AAACCGGTCG TGATAGAAGA GCTATTGGTG CGCATCACCA CCCATATGCA GCGGGCGCAG CTGGTCACGC ACACCCGCTC TGCAATCGAT TCAGCCGGTC GAGCTATTCT GGCCTTCGAC TCGGGCTATG CGATTACCTG GGCCACCCCT TTGGCTCAGC GGTTGGTTCA ATCCGTGGTC GACGCGCGAG ATCAGTTGCC ACCCCCCGTT CGCCAATGGC TTAAAGACAA GGATGCCGAT CCTTCTTTCC CGCTCTGGCA TCAGGGTGAG CGCCTGTTGT TTACTCGGAT CGAACCCGGT CTGTTGTCCA TCCAACGCCA TGCGGCACAG GCTGAACCGG AAGCACTAGC CAGGATATTC CAGCTGACGG CGCGCGAGGC GGAAAGCCTC TACTGGGTCG CCCTTGGAAA GACCAATAAG GAAATCGGTG AGATCCTGCA GATCAGCCCA CGCACGGTCA ACAAACACTT GGAGCACGTG TTCGAAAAGC TGGGAGTCGA AACCCGGACG GCTGCAGCGG CTCTGGTGTT AAGCCGACCC TCTGGCTGA
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Protein sequence | MNLHKDERGT ILLVDDAPDN LRVLHDALQQ QGYRVLVSTD GQSALDSVQL MPPDVIILDA RMPGIDGFET CKRLKNDLTT RDIPVIFMTG LSDTEYIVQG FQAGGVDYVT KPVVIEELLV RITTHMQRAQ LVTHTRSAID SAGRAILAFD SGYAITWATP LAQRLVQSVV DARDQLPPPV RQWLKDKDAD PSFPLWHQGE RLLFTRIEPG LLSIQRHAAQ AEPEALARIF QLTAREAESL YWVALGKTNK EIGEILQISP RTVNKHLEHV FEKLGVETRT AAAALVLSRP SG
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