| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1585 |
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| Symbol | |
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| ID | 8534743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1721644 |
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| End bp | 1723305 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646383974 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_003263462 |
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| Protein GI | 261856179 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA TCACAGGTAC GCGGGAAATC AATTCTGCAC TATTGCTTGA GGTTTCCAGA
CTCATGAGTA AATCAACAGC ATCGTCTGGT TATAAACTCA TGAGTTTGCT GAGTTTGCTC
TCTCGTTGGT CCAGTCTTCA CTACGGCCGG ATCATGTTGC CGAATTACTC CCTTCGAGTG
CTTGAGGTCG CCTACAGTTA TGGGCTTCCT GAAGAGCAGA TTGCGTTGGG TAAATATACC
GTACCATTTG ATCAGGGACT CACCGGTTTT GCCTGGCGAA CAGGTCAAGT ATCGCTGGTA
ACCGACGTGT TGGATGAATC GATCTTCATT CAGCGGATCG CTGAACCGAT TGAGGGTAGC
TTGAGCCGGA TTGGTTTTAT TTGCGTACCG ATCAATGTTG ATGGACTGGT AGTCGGTGTG
TTATCCGTTC AGCGCCGCGC TAATCCAAGG CGGTCCTATT CGGAGGATGT CGATTTGCTG
AGAATCATTT CCAGCATGAC TGGGCCAGTG TTAGTAAATA TGCGGCAACG GGTCCAGCAG
GTAAGTTTCC TACCATCTCA ACTTGACCAT GATGGTGGTC GTTACATCCG CATGTGTGAG
TCGAATAACA TTATCGGTTC AAGCCATGCC TTGTTGTCTG CGGTTAAAGA AATTGATCAG
GTCAAGAACA GCGAAGCACC GATCATGCTT CTTGGGGAGT CCGGAACGGG CAAAGAGATG
TTTGCACGAA TGGCTCACCG GGAAAGTCAG CGTCGAGATA AACCGTTTAT CTGCATCAAC
TGCGCATCAA TCCCGGAAGC TTTGCTGGAA TCGGAGCTTT TCGGCCATGA AAAGGGAAGT
TTCACCGGTG CTTATCGTCG GCAGAAGGGA AAAATTGAGC AGGCACACGA AGGCACGCTA
TTTCTGGACG AAATCGGGGA CATGCCGCTG GATCTTCAGG CGAAATTGTT ACGGGTGCTT
CAGGATAAGC AGGTTCAACC GATCGGTAGT GATCAGCCGC AACATGTCAA TTTCAGACTG
ATCACGGCTA CCCATGTCAA TCTGGCGGTT GCTCTGCAGG AAGGGCGCTT CAGACTGGAT
CTGTATTATC GGATCAACGT CATTCCCGTA TATCTACCTC CGCTCAGGAA GCGACAAGAG
GATATTACCC GTCTGGCTCA GCATTACCTC AATCACTATG CCCAGCTTTA TGACCGTAGT
GTCAGCTTTA CCCAGGGTAT CCATGAGGAA CTCCAGTCCT ACGGTTGGCC GGGCAATATC
CGCCAACTTC AGAATGTCGT CGAGCGAGCT GTACTCAAGG CGAGTGGACA ATTGATCAAT
GTCGAACAGA TCAAACACAT TTTGGATACT GAGCGGAGCA TGTATCAAAC GGATCAGTTA
GGCGTTACCA AGTTGGATAT CGCTCCATTC CTTGAACCTA CGACTTCAGC GCGCGAGTAC
GATTCTCCAC AGGAGGTTAA GTTTTCAGGG ACATCGTCAA ACCGGGTGAG TCGTGGTAAA
CGCAGCTACA TGAGAGTCTG CGAACATGAA AGCGAAAATA TCCGTGACGC CATGAGCAAG
TCTTCGGGTA ACCAAGCTCA AGCTGCGCGA ATACTGGGTA TGACTGCACG TCAATTCCGT
TATCGCCTAG CCAAATTGGG ATCTGAAGTT AGTCAACCAT AA
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| Protein sequence | MKEITGTREI NSALLLEVSR LMSKSTASSG YKLMSLLSLL SRWSSLHYGR IMLPNYSLRV
LEVAYSYGLP EEQIALGKYT VPFDQGLTGF AWRTGQVSLV TDVLDESIFI QRIAEPIEGS
LSRIGFICVP INVDGLVVGV LSVQRRANPR RSYSEDVDLL RIISSMTGPV LVNMRQRVQQ
VSFLPSQLDH DGGRYIRMCE SNNIIGSSHA LLSAVKEIDQ VKNSEAPIML LGESGTGKEM
FARMAHRESQ RRDKPFICIN CASIPEALLE SELFGHEKGS FTGAYRRQKG KIEQAHEGTL
FLDEIGDMPL DLQAKLLRVL QDKQVQPIGS DQPQHVNFRL ITATHVNLAV ALQEGRFRLD
LYYRINVIPV YLPPLRKRQE DITRLAQHYL NHYAQLYDRS VSFTQGIHEE LQSYGWPGNI
RQLQNVVERA VLKASGQLIN VEQIKHILDT ERSMYQTDQL GVTKLDIAPF LEPTTSAREY
DSPQEVKFSG TSSNRVSRGK RSYMRVCEHE SENIRDAMSK SSGNQAQAAR ILGMTARQFR
YRLAKLGSEV SQP
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