| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1535 |
|---|
| Symbol | |
|---|
| ID | 8534693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1667129 |
|---|
| End bp | 1668502 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 646383924 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003263412 |
|---|
| Protein GI | 261856129 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4938] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATCA CAGAACTTCA ACTTGAAAAA TTTAAATCAT TCGAATTGCA AAAATTCAAT
TTTAAAAAAA TAACCATATT GGCCGGAGCA AATAGTGCCG GGAAAAGCAC AATATTAAAT
GCTCTAGCAA CAATATTGCA AGGCAGTGAA ACCAGGCCAT TTCCATTTTA TTTCAGTAAT
TATGGGGGAA ATATTCACCT TGGTGGATAT AAAGATATCG TCAAAGATGG CAACTCTTCT
GACAAATTTG GAATTGGGGT TCGATTCGAA AACAATGGAG CTGAAACCTA TGTAAAAGGT
ACATACCGAT ACGCAACAAA TGGACACCAA ATACTGGTAG ATTCAATCAT AATAGAAATA
GATGAACAAA CTCTTGAAGT AAAGTGGAAT GGCCAAGTAA AAGGGTATTC AGTATATAGA
AAAATAAGCG AGAACAAAAA AACTGAAGAT TCAAAAGTGG CAAAGGCAAT ATTCACATCA
CTTTCTGAGT TATTTTCCAA AACGAATGAT ACAGAAAAAA ATACCAAGAT CCAGAATTCA
ATCGATGAAT TTTTATCAAG CATATCAAAG TCAAGTGACA ACTGGGAACC AGTTGAGCTG
AAAAAGGCAT CAAACCTATA TTCATCTTTA TGCAGCACCA TAAGCTATAA GATAACAATT
GATAGTTACA TTAAAAGCCT ATCAAAGCTT TCCAACTTGA CAACGTATAT TGGCCCTATC
AGGCCATATC CCTCTAGGCA CTACTACATA TCAAGCCTTC AAGAGAAAAT CGACTCATTA
GGAAACAATG CTTTTCAAAT CCTGATAGAC TGGTATTCAT CAGATAAAAA AAAATTTAAC
AAAGTTATCA ATGGACTACA AACATTAAAA TTAGCCGACT CAATTATCAT AGGGTCACTA
AAAGATGAGT TAGTAGAAAT CAATGTCGCC CCATATAATC AAAGACATAC CGTCAACTTA
AGCGACGTAG GATTTGGTCT TTCTCAAATT TTACCCGTTT TGGTTGCTAA TGCAGCCTCA
GAAAATGACT CTACGCTCCT TATTAATCAA CCAGAAGTAC ATTTACACCC TTCCAGCCAA
GCAGAATTAG CGAATTACTT TTTCACGGAA AGTAAAAACA AGAACTTTAT AATTGAAACG
CACAGTGAAT ATTTAATAAA TAGATTCCGA CTTTTGGTCG CAGAAGGGAA AATTAAAAGC
GAGGACATAT CAATTATTTA TATTGACAAA GGTGAGCAAG ACCCCACATT AAGTGAAATA
TCGATATCAG ATAATGGCGC ATTAATTTCG GCTCCCGACT CTTTCTTCAA CACATATTAT
GTTGACAGCA AAGCCCTTGT CTTTTCCAGT ATTGGAGGCG GAGAAATTGA GTAG
|
|---|
| Protein sequence | MKITELQLEK FKSFELQKFN FKKITILAGA NSAGKSTILN ALATILQGSE TRPFPFYFSN
YGGNIHLGGY KDIVKDGNSS DKFGIGVRFE NNGAETYVKG TYRYATNGHQ ILVDSIIIEI
DEQTLEVKWN GQVKGYSVYR KISENKKTED SKVAKAIFTS LSELFSKTND TEKNTKIQNS
IDEFLSSISK SSDNWEPVEL KKASNLYSSL CSTISYKITI DSYIKSLSKL SNLTTYIGPI
RPYPSRHYYI SSLQEKIDSL GNNAFQILID WYSSDKKKFN KVINGLQTLK LADSIIIGSL
KDELVEINVA PYNQRHTVNL SDVGFGLSQI LPVLVANAAS ENDSTLLINQ PEVHLHPSSQ
AELANYFFTE SKNKNFIIET HSEYLINRFR LLVAEGKIKS EDISIIYIDK GEQDPTLSEI
SISDNGALIS APDSFFNTYY VDSKALVFSS IGGGEIE
|
|---|
| |