| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1503 |
|---|
| Symbol | |
|---|
| ID | 8534661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1626879 |
|---|
| End bp | 1629080 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646383893 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003263381 |
|---|
| Protein GI | 261856098 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTTCGA TCAATGCGTC CTCGAACTGG CACCTCGAAT GTGGGCAGGG TGTTTATCGA
TTGAAACCCC GAAAGCCACA AAAGAAGGGC TGGTTTGTTT TGGATATTTC CTATACCGGA
AATATTTCCC CGCTCGTTAA TCCCGTCGTG AAACTCTTCC TGGTGACGGG CGAGCCAGCT
CAGACCCTGC CACTCATCAT CCACGCCGAT AGGCTACGCG TTATCTTTCT AGCACCCGAG
CCCTTGACGC TGCTAGAAGT ACAGCAGGCC GACGCATTAC AAACAGCCGC GAGCCTGCGT
TTTCGTTTGT ACAGACGCGC TGAGTTCGTC GCGTTGGCCT CGATGATGTG GGCGGTGAGT
CGGCGTGATG CGCGCAAAGG CATCAGCTCA ATCCGAGTTT ATGCCAAATC CCGTGCACGA
TACAAAAAAC ATGGTTTTTC TGGCTATCTG ACTCGGCTAT TCAAAGAATA TTACCTGGTC
GATACCCATC GCCTAGAAGA GGCAGATATC TATCAATCCT ATATCGCCAA AACCGAGCAC
CGTTCACAGG ATTCCATTCA AAGTACACTC ACCTCGCTCG GTTACCAGCC TGTAATCTCC
GTCATTATGG CTACCTGGCA AAGTGATCTA CGTTGGCTGG ATGCAGCCAT TCAATCCGTA
CTGCAACAGT CTTATCCGTA TTGGCAACTG TGCATAGCCG ATGATGCCTC GGAACAAAAA
AAACTAATTG AATTACTCAA TCACTACAAG AAGAAAGATT CTCGAATTCG TGTCACGTTT
CGCTATGAGA ATGGGCATAT CTCCGCTGCC CAGAATAGCG GGCTGTTACT GGCCACCGGC
GCTTACGTCA CTTTTCTTGA TCATGATGAT CTTCTCGCGC CCAATGCGCT GCTCGCGGTT
GCAGAGGCGC TTCAACAACA GCCAAGGCCG CTGTTCTTGT ATAGCGACGA AGACAAGATT
GATGGTACTG GCAGGCGAGT CAATCCTCAT TTCAAATCCG ACTGGAATCC GGATTTACTG
TGCGCACAAA ATTACATTAC CCATTTAATG GTTGTAGAGC GCGCGATGGT CGAATCGGTA
GGTGGCTTCC GTGTGGGCGT CGAAGGCAGT CAGGATCATG ATCTTGCCCT GCGCGTGACA
GAGAAATTAC CGCCAGCCTT GATTCATCAC ATCCCGCAGG TGCTCTATCA CTGGCGCATC
ACAGAGAACT CAACGGCGTT GCATGCCGAT GCCAAAAACT ATACGTCTTC CGCCGGCGTG
GCGGCGATTG AAGAACACTT TAAGCGTAAA AATCAAGACG ATGTGATGGT GCAGCCGGGT
TTGTTGCCCA ATACCTACCG TGTGCTGCAC CCCATTCCAA AACCCGCACC ACTGGTCACT
TTATTAATAC CAACGCGCGA TCGGCTGGAC ATGCTCAAAC CCTGCATTTC AAGCATCATA
GAAAAAACCA GCTACAAACC CTACGAAATC ATAATTTTAG ATAACGGCAG TAACGAGCCG
CAAACACACC TTTTCTTTGC AGAAATTCAA GCGCAGCATG AACATATTCG TGTGCTGAGC
TATGACAAGC CTTTCAATTA TTCCGCAATC AATAACTTTG GCGTCGCCCA TGCTCAAGGT
ACGATTATCG GTCTGATCAA TAATGATATC GAGGTCATCC AATCGGGTTG GCTGACGGAA
CTGGTCAGCC ATGCCGTTCG CCCCGAGATT GGCTGTGTGG GCGCCAAACT TTATTTCGAT
GATGGCAGCA TCCAGCATGC GGGTGTTATT TTGGGTATTG GCGGCGTGGC CGGTCATGCC
CACAAATATT TTGCGCGGGA TGCCCACGGC TATTTCAGCC GCTTACAGTT GGTGCAAAAT
TTATCGGCCG TCACTGGCGC CTGCCTTCTC GTGCGCAAGG AAGTATTCGA ACAGGTCGGT
GGCCTTGAAG AAGATCATCT AACTGTCGCC TTCAATGATA TTGATTTATG CCTCAAAGTG
CGTGAGGCGG GCTATCGCAA CCTATGGACG CCACACGCGG AACTCTATCA TCACGAATCC
AAATCGCGCG GCCGAGATGA TGCGCCAGAA AAACAGGCCC GCTTTCAGCG CGAAGTAGCT
TGGATGATAG CGCGTTGGGG CGCGCAGTTG AATAGTGACC CGTACTACAA CCCCAATCTC
ACGCTACAGC ACGAAGATTT TTCGATCCGC CTTCATGAAT GA
|
|---|
| Protein sequence | MISINASSNW HLECGQGVYR LKPRKPQKKG WFVLDISYTG NISPLVNPVV KLFLVTGEPA
QTLPLIIHAD RLRVIFLAPE PLTLLEVQQA DALQTAASLR FRLYRRAEFV ALASMMWAVS
RRDARKGISS IRVYAKSRAR YKKHGFSGYL TRLFKEYYLV DTHRLEEADI YQSYIAKTEH
RSQDSIQSTL TSLGYQPVIS VIMATWQSDL RWLDAAIQSV LQQSYPYWQL CIADDASEQK
KLIELLNHYK KKDSRIRVTF RYENGHISAA QNSGLLLATG AYVTFLDHDD LLAPNALLAV
AEALQQQPRP LFLYSDEDKI DGTGRRVNPH FKSDWNPDLL CAQNYITHLM VVERAMVESV
GGFRVGVEGS QDHDLALRVT EKLPPALIHH IPQVLYHWRI TENSTALHAD AKNYTSSAGV
AAIEEHFKRK NQDDVMVQPG LLPNTYRVLH PIPKPAPLVT LLIPTRDRLD MLKPCISSII
EKTSYKPYEI IILDNGSNEP QTHLFFAEIQ AQHEHIRVLS YDKPFNYSAI NNFGVAHAQG
TIIGLINNDI EVIQSGWLTE LVSHAVRPEI GCVGAKLYFD DGSIQHAGVI LGIGGVAGHA
HKYFARDAHG YFSRLQLVQN LSAVTGACLL VRKEVFEQVG GLEEDHLTVA FNDIDLCLKV
REAGYRNLWT PHAELYHHES KSRGRDDAPE KQARFQREVA WMIARWGAQL NSDPYYNPNL
TLQHEDFSIR LHE
|
|---|
| |