Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1476 |
Symbol | |
ID | 8534633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1593788 |
End bp | 1594741 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646383866 |
Product | cytochrome c class I |
Protein accession | YP_003263355 |
Protein GI | 261856072 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.993128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGC ATATTCAACC AATCAAGCCT GTGTTGACGT CGATAATGCT GGCATCGATG GCCTTGGTTC CCGTAGTGAG TTTCGCCGCT GGCGAGGCGG TGCCAAAATC CGCCCCTAAT GCGGCAGTCA TGACCGGATC ACACTTCCAA GCGCCTGACC CTTCCACCAT ACCGAACGAC GAATTCGGCA AGATGGTGCA GTTGGGCCGC AACATCATGT TCGAGACCAA AAAATACGCC CCACAATATG TAGGTAATTC GCTCAATTGT GTGAACTGTC ATACCGATGG CGGCGCGATG GCCGGGTCCG CGCCATTATG GGGTGCTTGG GTGAGTTATC CGGCCTATCG CGGCAAGAAC AAAAAAGTAA ATACCTATGA AGATCGCCTG CAGGGGTGTT TCCGTTACAG CATGAACGGC AAAATGCCGC CGCTCGGCAG CGATGTGCTG GTGGCCTTAT CGGCGTATTC GTATTGGCTG GCCAAGGGCT TGCCGACGGG TGACAACAAA ATTGCCGGTC GCGGTTACCC AGATTTGCCC GAGCCCAAGC AAGCGCCGGA TTTTGTTCGC GGTAAAACCG TGTATGAAGC CAATTGCGCG ATTTGCCATG CTGCCAACGG TCAAGGTCGC GTGGTGAATG GCACCGTCGT GTTTCCGCCT TTGTGGGGCG CGCAGTCGTT TAACTGGGGG GCGGGCATGG GCAGCATCAA AAATGCCGCA AAATTCATTT TCGCCAATAT GCCCTATGGT CAAAGCTACA GCCTGACCCC ACAACAAGCC TGGGATGTGG CCTATTACAT GGATGGGCAC GAACGCCCGC AGGATCCGCG ATGGCAAGGC AGCGTAGCGG CCACGCGTGC CAAGTATCAC GACAGTAAAA ACAGCCTCTA TGGCACCAAG GTGAACGGCG TTCTGTTGGG TGATACCGGC GCACCGAAGC CTTTTGAGCC CTAA
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Protein sequence | MSKHIQPIKP VLTSIMLASM ALVPVVSFAA GEAVPKSAPN AAVMTGSHFQ APDPSTIPND EFGKMVQLGR NIMFETKKYA PQYVGNSLNC VNCHTDGGAM AGSAPLWGAW VSYPAYRGKN KKVNTYEDRL QGCFRYSMNG KMPPLGSDVL VALSAYSYWL AKGLPTGDNK IAGRGYPDLP EPKQAPDFVR GKTVYEANCA ICHAANGQGR VVNGTVVFPP LWGAQSFNWG AGMGSIKNAA KFIFANMPYG QSYSLTPQQA WDVAYYMDGH ERPQDPRWQG SVAATRAKYH DSKNSLYGTK VNGVLLGDTG APKPFEP
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