| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1475 |
|---|
| Symbol | |
|---|
| ID | 8534632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1592068 |
|---|
| End bp | 1593732 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646383865 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_003263354 |
|---|
| Protein GI | 261856071 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.460183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACTT CCCTGACCAT CCGCCACATC GCCCTGATCG ACGAGATCGA GATTCAGTTC
GCGACCGGTA TGACCACGCT CACCGGCGAG ACCGGCGCGG GCAAATCCAT CCTGATCGAT
GCCATCGGCC TCATTCAGGG CGAACGGGCC AACACGCAAC TGATTCGAAC CGGCTATGAC
GATGCGGAAG TTATCGCGGT ATTTCACGTT ACACCGGGCT CGCCCGTGGC CGAATTCCTC
GAAGAACAAG AGCTGCTCGA CGATGAACTC ATCATCCGGC GCAGCTTAAA TCGCGAAGGG
CGCGGCAAAA TCTGGATCAA TGGCCGCCCC TGCCCCGCCG CGACGCTCAA AACGCTCGGC
GGCCTGTTGA TTGACGTCCA TGGCCAGCAC CACAACCAAA AACTGCTTGA AAAGCGCTAC
CAACGATTAC TTTTAGATAG CTTTGCCGGG CTTACAGGGC AAACCCAGAA GCTGGCGCAG
CTTTCACGGG AACTCCGCCA CAATGAGCAC AAGCTCGAAG AAATCCGAAA CGCCGAACAA
AGCCGCGAAG ACCGCCGCGC CCTACTGACC TTTCAGCTCG AAGAAATCGA TCAGATCGAC
CCGCAACCGG ATGAATTCAA CCAGTGCCAT CAGTTATTGA GCCGTCTTTC TCGCCAGGAT
GAGTGGCGCA GTGTGCTCGC CGCGCAGCTG GAACAGCTCT TTGATGGGGA CGAAAATGTG
CACGACCGGA TCGGCCACGC ACAACAGGCC CTCGCGCGGA TCGTGGGGCT CGATGACGCC
CTCTCGCCGC TGATCGACGC GCTGGAAACC GCCCAGATAC AAATCAGCGA GACCGCAGAC
ACCCTGCGTG ACCGGCTCGA TTCGGTCGAA GACGACCCAG AGCAACTCGA ACGGGTGCAG
GCCCGTCTTG AGCAATTGCA TCAGTTGGCG CGCAAGCACC GCATTCCACC GGAGCAACTA
GATGACATGA TCGCCGGATT GCGTGAAGAA GCCACAAGCC TCGATCACGC GCAAGCAGAC
AGCGCCGCGC TCGAAGCGGC AATCCAAGCG CAGATGGCTG CCTTTGATGA GCTTGCCGCC
GACATTTCCA GCAAAAGGAA AACCGCCGCC GCGAAACTGG CAGCCGCCGT GACAGAAGCT
ATTCGCCTAC TTGGTATGCC GCATGGGCAA ATCGAAATCC CGATCACCCC GGTGGCCGAC
CCGTCAGCAC GCGGCGAACA TGGTATCGAT GATGTGGTAT TTCTGATCAG CGCCAATCGC
GGACAACCGC CTCAACCGCT CGACCAGATA GCCTCGGGTG GCGAACTGGC GCGCGTGAGC
CTGGCGTTCA AAACACTCAC CGCCGCCTTT GATCCGGTGG AAACCTTTAT TTTCGATGAA
GTGGACACGG GTATTGGCGG TGCGATTGCC GAAATCGTGG GGCGTCATCT GCGTGCCCTC
GGCCAGACGC GGCAGGTGTT TTGCGTAACC CACCTCCCGC AGGTAGCCGC GCAGGGACAA
CATCAGATTC AAGTGCAGAA ACATCACCTC GAAAGCGGCA CCGTGACCGA GATCGTGCCA
CTAGATCTCG CAGCGCGTAT CGACGAAATC GCGCGGATGA TCGGCGGCAT CGACATTACC
GCCCAGACTA GGGCGACCGC TCAGGAAATG TTAGCTCGCG ATTGA
|
|---|
| Protein sequence | MLTSLTIRHI ALIDEIEIQF ATGMTTLTGE TGAGKSILID AIGLIQGERA NTQLIRTGYD
DAEVIAVFHV TPGSPVAEFL EEQELLDDEL IIRRSLNREG RGKIWINGRP CPAATLKTLG
GLLIDVHGQH HNQKLLEKRY QRLLLDSFAG LTGQTQKLAQ LSRELRHNEH KLEEIRNAEQ
SREDRRALLT FQLEEIDQID PQPDEFNQCH QLLSRLSRQD EWRSVLAAQL EQLFDGDENV
HDRIGHAQQA LARIVGLDDA LSPLIDALET AQIQISETAD TLRDRLDSVE DDPEQLERVQ
ARLEQLHQLA RKHRIPPEQL DDMIAGLREE ATSLDHAQAD SAALEAAIQA QMAAFDELAA
DISSKRKTAA AKLAAAVTEA IRLLGMPHGQ IEIPITPVAD PSARGEHGID DVVFLISANR
GQPPQPLDQI ASGGELARVS LAFKTLTAAF DPVETFIFDE VDTGIGGAIA EIVGRHLRAL
GQTRQVFCVT HLPQVAAQGQ HQIQVQKHHL ESGTVTEIVP LDLAARIDEI ARMIGGIDIT
AQTRATAQEM LARD
|
|---|
| |