| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1358 |
|---|
| Symbol | |
|---|
| ID | 8534514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1468270 |
|---|
| End bp | 1469511 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646383749 |
|---|
| Product | protein of unknown function DUF140 |
|---|
| Protein accession | YP_003263239 |
|---|
| Protein GI | 261855956 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTT TCAAGCTAAT GATAAGCTCC ATGACAATCA TTACCAAGAG ATACCGACAC
ACCCTCATGT CAACGGCGGC AGAAACAACA AGTTCAGCAG AAACGCCCCC CTTAGCCCGC
TGGCTTGAGG ACAAAGACGC ACGCGACAGG CAGGTGACTG TGCTGGTACT GAGCGGCACG
TGGACGATCC ACAGCCTGCA GCATGTGCCA ACGCTGGATA CGTTGTCCGG CGCACCAACC
AAAAAAGCGG ATAAACCCTG CATTGTGCTT CGAAGCGAGA TGAGCGCGTT TGATGGTGCG
GGCGCTCTGG TGCTGGCCCG GTGGATTAGA ACGTGGCGGG CCGATGGCTT TGAGGTTGAT
CTTGGCGAGT TTCCACCGCG CGAAACGTCG TTACTCCAAT TACTCGACGA TCGGCTCGTC
GATACCGAAC CCGCGCCCGT AAAAAAACCG AAAATGATCG CCCGCATCGG TCAGTTCACG
GTGGAACAAT GGCATGAAAC CCGTTCTTTT CTGGCATTTC TGGGCGAACT CGTTTGGCGC
GGTGCTCCGC TTTTGCTCAC TTTTTGGCGC ATTCGTTGGC GGGCAGTCAT ATCAGAAATC
GATGCGGCCG GTGTGCGGGC GCTTGGCATC GTCGGTTTAC TCTCGTTCAT GATCGGCATG
GTCATGGCCT ATCAAGGCGG CGCCACACTG CAAAACTATG GTGCCAACGT GTTGATTGTC
GATTTGGTAG GCATCATCAC GCTACGTGAA ATGGGGCCCT TACTGGCTGC CATCATCGTG
GCCGGTCGCA CCGGCTCGTC ATACACCGCT CAATTGGGCA CCATGCGGAT CACCGAAGAA
ATTGATGCCC TGCGCGCCAT TGGCGTACCG CCGTTTGAGA TTCTGATTTT CCCCAAGGTG
CTGGCCTTGA TAATCACCCT GCCCCTGCTC TCCATCTTCT CTGATTTGAT GGGTCTGCTG
GGCGGAGCGG TGGTGGCCAA CTATGGCTTT GGGGTGTCTT TCTCAGTGTA TTTTGATCGA
ATGCCCGAGG CCGTATCGCT CACAACGCTT TGGCTCGGGC TGCTCAAAAC CCCGGTATTC
GCCATCGTCA TCGCGTTGAT CGGCTGTATG CAGGGGCTGC GGGTGCGCGG TAGCGCGGCG
GAAGTCGGCC ATGCGACGAC GGTCAGCGTG GTACAAGCCA TTTTCATGGT GATTGTGATC
GATGCGCTCT TTTCGGTGCT CTACAACGTG ATGGGCTATT GA
|
|---|
| Protein sequence | MHFFKLMISS MTIITKRYRH TLMSTAAETT SSAETPPLAR WLEDKDARDR QVTVLVLSGT
WTIHSLQHVP TLDTLSGAPT KKADKPCIVL RSEMSAFDGA GALVLARWIR TWRADGFEVD
LGEFPPRETS LLQLLDDRLV DTEPAPVKKP KMIARIGQFT VEQWHETRSF LAFLGELVWR
GAPLLLTFWR IRWRAVISEI DAAGVRALGI VGLLSFMIGM VMAYQGGATL QNYGANVLIV
DLVGIITLRE MGPLLAAIIV AGRTGSSYTA QLGTMRITEE IDALRAIGVP PFEILIFPKV
LALIITLPLL SIFSDLMGLL GGAVVANYGF GVSFSVYFDR MPEAVSLTTL WLGLLKTPVF
AIVIALIGCM QGLRVRGSAA EVGHATTVSV VQAIFMVIVI DALFSVLYNV MGY
|
|---|
| |