Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1332 |
Symbol | |
ID | 8534488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1442623 |
End bp | 1443282 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646383723 |
Product | cytidylate kinase |
Protein accession | YP_003263213 |
Protein GI | 261855930 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000433479 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCCGG TCATTACCAT CGATGGACCC AGCGGTTCGG GCAAGGGCAC ACTGGCCCGG CGTTTGGCCG AGCAGCTCGG CTTTCATCTG CTCGATTCCG GTGCGCTGTA TCGCTTGACC GCATTGGCAG CCCAGAAGCG GAACATTGAT TTGGAAGCCC CCGAAGTGGC CGCCGTAGCG CAGTCACTCA ATGTGCGTTT TGATCCCGAT GGCGCAGCTT ATCTGGACGA CGCGTGCGTT GATTCGGTTT TGCGCACAGA ACAAACTGGA GCGATGGCCT CAAAAATTGC AGCGCGACCC GACGTGCGTG CGGCATTGCT TGAGCGTCAG CGAGCGTTTG CGACAGCACC GGGGCTTGTC GCCGATGGCC GTGATATGGG TACCGTCGTC TTTCCGGACG CGCCAGCCAA ACTTTTTTTG GACGCCAGCG CGCAAATTCG GGCCGAACGG CGCTATAAAC AGTTGATCGA GAATGGTTTA AGTGCTAATT TAGCCGCCCT CGTCGAGGAG ATACAGGCTC GGGACGATCG GGATCGCAAT CGAGCGGTTG CCCCGCTTGT TCCCGCCGAA GATGCCTTGG TGGTTGATTC CACGCATCTG TCGATTGAGG CCGTTGAAGC ACGGATGATG GAATTCATTC GTGCGCAAGG TGTTGTTTGA
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Protein sequence | MIPVITIDGP SGSGKGTLAR RLAEQLGFHL LDSGALYRLT ALAAQKRNID LEAPEVAAVA QSLNVRFDPD GAAYLDDACV DSVLRTEQTG AMASKIAARP DVRAALLERQ RAFATAPGLV ADGRDMGTVV FPDAPAKLFL DASAQIRAER RYKQLIENGL SANLAALVEE IQARDDRDRN RAVAPLVPAE DALVVDSTHL SIEAVEARMM EFIRAQGVV
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