| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1237 |
|---|
| Symbol | |
|---|
| ID | 8534391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1340108 |
|---|
| End bp | 1340680 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 646383628 |
|---|
| Product | protein of unknown function DUF615 |
|---|
| Protein accession | YP_003263120 |
|---|
| Protein GI | 261855837 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.232307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC GTCGGTTTTA CGCGGCCAAA AAAACACAGC AACTCGAAGT GCCGGAAGAT
ACCGACTTCG GGCCCAGCAA GACCGAACGC AAGCGCGAAG CCCATGCCGC CCGCGATCTC
GGCGCTGAGC TTTGTGCATT GAGTGATGCG CAACTGGCGG CTTTCCCGCT GTCCGATTCG
TTGCTGGCGG CCATTGGCGA AGCTCGGAAT ATCAATGCAC ACGGCGCCCG CAAACGTCAT
CTTCAATATA TCGGCAAACT CATGCGCCAG CACGATGTGG TTGCCATTGA GGCCGAGTTG
AACCGGATCG ATCCCGATGC ACCGCAAAAT ATTCGTTTAC AGCATGAGAG CGAGCGTTGG
CGTACGCGTT TGTTGTCTGA TGATGCATCT GCAGTAACGG ATTTCATTAC ACGTTATCCC
CAAGTGGATA TTCAGGCTTT GCGCCTGTTG TTGCGCCAAG TTGCCAAGGA GCGGGCAGAG
CAGAAGCCGC CCCGGTATTT TCGCGAACTG TTTCGTCTGG TGCGGGATAC CTTGAGTCAG
ATGGACGAGC AGGCCGTCGG AAACGATGCC TGA
|
|---|
| Protein sequence | MSDRRFYAAK KTQQLEVPED TDFGPSKTER KREAHAARDL GAELCALSDA QLAAFPLSDS
LLAAIGEARN INAHGARKRH LQYIGKLMRQ HDVVAIEAEL NRIDPDAPQN IRLQHESERW
RTRLLSDDAS AVTDFITRYP QVDIQALRLL LRQVAKERAE QKPPRYFREL FRLVRDTLSQ
MDEQAVGNDA
|
|---|
| |