Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1235 |
Symbol | |
ID | 8534389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1337175 |
End bp | 1338710 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383626 |
Product | deoxyribodipyrimidine photolyase-related protein |
Protein accession | YP_003263118 |
Protein GI | 261855835 |
COG category | [R] General function prediction only |
COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00923753 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCCAAC TCATTGTCAT TTTGGGAGAT CAACTTAATC GCAACAGTGC GGTTTTCGAT GGGTTCGATC CCGCCCAGGA TGCAGTATTC ATGGCCGAGG CAACCGGCGA GGCCGCCCAT GTCTGGTCGC ACAAGCTGCG TATTGCCCTG TTCTTCAGTG CCATGCGGCA TTTTGCTGCG GCCCTGAGAA GCGAAGGCTT AACGGTTCAT TACGCCCAGA TCGGTTCACC CCCCCACGGG GCTTTGGCCG ATGCCCTTGC CGCGGCCATC GTGGTGCATC AACCGCAGCA AGTCGTATGG GTATCGGCTG GTGCCGAACG CCTGAATCAT GCACTGAAAG CGACCTGTGA TCAGCACAAA GTGCCCTGGA AAATCTATCC GGACCGACAT TTCATTGCCA CCGAAAACCA GTTTTCGGAC TGGGCAAAGG GCCGAAAATC TTTGCGACTG GAGTATTGGT ACCGCCAGCT TCGCCAGCAG ACTGGTCTGT TGATGGAGGA TGATCAGCCC ATCGGGGGCG CGTGGAATTT TGATGCACAG AATCGTGCAG CATTCGATAC ACGCGGACCT GGCCTATTGC CTGCCCCCAT GGGCTTTCCG CCCGATGCCA TTACCCAACA GGTCATCGAA ACCGTAGCGC GCTATTTTCC GGGGCATCCG GGCGCATTGG ACGGGTTCGA CTGGCCGATC ACGCGAGAGC AGGTAGAAGC CGCACTCGAA GATTTCATCA CCCATCGACT GCCGCTGTTC GGTCACTATC AGGATGCGAT GTGGACGGAT GAGCCTTGGC TTTATCACAG CAGACTCTCA GCCGCGCTCA ACCTCAAGCT TATCGATCCG GCTACCGTCT GTCGTGCCGC AGAGGCGGCA TACCGTCAGG GACAAGTGCC GTTGGCCGCG GCGGAGGGAT TCATCCGGCA GATACTGGGC TGGCGGGAGT ATGTCCGCGG GCTTTATGCT CATTATGGCG ATGAATGGCT CGACATGAAT GCATTGAACG CCCAGCATGA TTTACCGGAT TTTTTCTGGA CGGGCGACAC ACCGGCCCAC TGTCTGAGCC AGACAATCGG TCAGACCATG CGAACGGGTT ACGCTCATCA TATTCAACGG TTGATGGTGA CCGGTTTATA TTGCCTGCTC GCAGGCGTTC GACCTCGGGC TGTGCATGAA TGGTATCTGG CCGTCTACGT CGACGCAGTG GAATGGGTTG AGATACCGAA TGTGATCGGC ATGAGCCAAT TCGCCGATGG CGGAATCATG GCATCCAAGC CCTATATCGC CAGTGGCAGC TATATCGATC GAATGAGCAA TTATTGCGCA CACTGCTCGT TCCATCCCAA GGAGGCGGTG GGTGCAAAGG CCTGCCCGTT CACGACACTG TACTGGGCTT TTCTGGACCG ACACGAAAAG CGTTTTGCCC AGCACCCCCG TCTTGCCCTG CAGGTCAAGA ACCTGCAACG AAAATCGGCG GAAGAACGGG CGTTAATCCG CGCACAAGCT GAATCTCATT TAGCCGGTGT GATGCAAAAA CCTTAG
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Protein sequence | MRQLIVILGD QLNRNSAVFD GFDPAQDAVF MAEATGEAAH VWSHKLRIAL FFSAMRHFAA ALRSEGLTVH YAQIGSPPHG ALADALAAAI VVHQPQQVVW VSAGAERLNH ALKATCDQHK VPWKIYPDRH FIATENQFSD WAKGRKSLRL EYWYRQLRQQ TGLLMEDDQP IGGAWNFDAQ NRAAFDTRGP GLLPAPMGFP PDAITQQVIE TVARYFPGHP GALDGFDWPI TREQVEAALE DFITHRLPLF GHYQDAMWTD EPWLYHSRLS AALNLKLIDP ATVCRAAEAA YRQGQVPLAA AEGFIRQILG WREYVRGLYA HYGDEWLDMN ALNAQHDLPD FFWTGDTPAH CLSQTIGQTM RTGYAHHIQR LMVTGLYCLL AGVRPRAVHE WYLAVYVDAV EWVEIPNVIG MSQFADGGIM ASKPYIASGS YIDRMSNYCA HCSFHPKEAV GAKACPFTTL YWAFLDRHEK RFAQHPRLAL QVKNLQRKSA EERALIRAQA ESHLAGVMQK P
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