Gene Hneap_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1177 
Symbol 
ID8534330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1282299 
End bp1283225 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content52% 
IMG OID646383567 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003263060 
Protein GI261855777 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTTC GGGAAGAAAA ACTGCTGCGA CGAGTGACTC TTGCCTCTGT GGGTGTCGCG 
ATATTGTTGA TCGCACTCAA ACTGGTGGCG GCAATCAGTA CCAACGCAAT CAGCATGATG
GCGTCCTTGA TCGACTCGAC AATGGATCTA TTCGCTTCGC TCGTTACCTT GTTTGCGGTT
CGAATTGCAT TGCAACCCCC GGATGAAGAT CATCGCTTCG GTCACGGCAA GGCCGAACCA
CTGGCTGCAT TGGCCCAGGC TACGTTCATT GCGGGTTCGG GTGCGTTCTT GTTGCTAGAA
GCCGTTCAGC GCCTGGTTCG ACCACAAGCA ATTGAAACCG TCGACTGGGG GATCGCCGTG
ATGGTTATAT CTATGATAGC GACAGCGTTT CTGGTCCTCT TTCAGCGGCA CGTTATTCGT
GTCACCCAAT CGCCGGCCAT CAAAGCGGAT GCGGCGCATT ACGGATCTGA CTTTCTGATC
AATGCCGCCA CAATTGCGGC CTTATTGTTG GCTCATCAAG GTATAGGCTG GATTGATCCA
ATTTTTGGTG CGTCCGTAGG TGGCTTCATC CTGCTCAGTG CCTGGTTTGT TGGTCGCAAG
GCAATGGATC AGCTCATGGA CAGGGAGGTG CTCGATGGCA GTGAGGCTCG TATTCATGCC
ATTGCAGTCA GCCACCCTCG TGTGGAAGCG GCAGATCACA TACGCACAAG AATGGCTGGC
CGGATCATGA TCATTCAGTT GTATATCTAT CTGCAAAATG ATCTCGATCT CGCACACGCA
CACGTCATCG GGGACGAGGT TGCAGAAAAG ATTCAAGAAA TATTTCCCGG CGCCGACATA
TTGATTCATG AAGAGCCATT TCATGGCACA AACGCACCAT CCATCACCAA ATCCGAGACG
GGCCCATCAA TTCAGGAGAT CGTATGA
 
Protein sequence
MSLREEKLLR RVTLASVGVA ILLIALKLVA AISTNAISMM ASLIDSTMDL FASLVTLFAV 
RIALQPPDED HRFGHGKAEP LAALAQATFI AGSGAFLLLE AVQRLVRPQA IETVDWGIAV
MVISMIATAF LVLFQRHVIR VTQSPAIKAD AAHYGSDFLI NAATIAALLL AHQGIGWIDP
IFGASVGGFI LLSAWFVGRK AMDQLMDREV LDGSEARIHA IAVSHPRVEA ADHIRTRMAG
RIMIIQLYIY LQNDLDLAHA HVIGDEVAEK IQEIFPGADI LIHEEPFHGT NAPSITKSET
GPSIQEIV