| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1172 |
|---|
| Symbol | |
|---|
| ID | 8534325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1276519 |
|---|
| End bp | 1277529 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646383562 |
|---|
| Product | Porphobilinogen synthase |
|---|
| Protein accession | YP_003263055 |
|---|
| Protein GI | 261855772 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC GCCCTTTCCC CGCCCACCGT CCGCGTCGCA TGCGTCGGGA TGATTTCAGT
CGGCGCATGA TGCAGGAAAA CACCCTCTCA GCGAATGACC TGATTCTCCC GGTATTCGTT
CTCGAAGGGC AAGGGGAACA GGAACCGATT TCATCTTTGC CGGGCATTTA TCGACAGAGT
ATCGATTTGC TGCTGGATAC AGCCGATCGG GCGCAAAGCC TCGGTATTCC GGCCCTCGCT
CTTTTCCCGG TCACGCCAAT GAGCGCCAAA TCGCCCAATG CCGAAGCCGC CTACGACCCG
GACGGCTTGG TTCAACGCAC AATCCGCGAA TTGAAGAATA CATTCCCGAA TCTGGGCATC
ATGACCGATG TCGCACTCGA TCCGTACACC ACGCATGGAC AAGATGGCCT GACCGATGCC
AATGGTTATG TGCTGAATGA CGAAACGACT GAAGTTCTGG TCAAACAAGC GCAGTCACAC
GCCGCAGCCG GGGCTGATAT CGTGGCCCCC TCCGACATGA TGGATGGCCG CATCGGTGCC
ATCCGTCAAC AACTGGAGGC TGCAGGACAC ATCCATACCC GAATCATGGC CTACAGTGCG
AAGTATGCTT CGAGCTTTTA CGGTCCATTC CGTGATGCGG TTGGTTCTGC CGGCAATCTG
GGCAAGGCCG ATAAAAAAAC CTACCAGATG GATCCGGCCA ACTCCGATGA AGCCCTGCAT
GAGGTGGCCA TGGATTTGGC CGAAGGCGCG GACATGGTCA TGGTCAAGCC GGGGATGCCC
TACCTCGACA TCGTACGGCG TGTCAAAACC GAGTTGAAAG TGCCCACCTT TGCTTACCAT
GTCTCAGGGG AGTACGCCAT GCTCCGCGCA GCAGCCGACA ACGGCTGGCT CGATTGGCGC
AAATGCCTGC TGGAAACCAT GATGGGCTTC CGTAGAGCGG GAGCAGACGG TGTTCTGACC
TATGCCGCAC TGGATGTTGC AGAGTACTTG GCTGTGGGCG ACATCCAATA A
|
|---|
| Protein sequence | MINRPFPAHR PRRMRRDDFS RRMMQENTLS ANDLILPVFV LEGQGEQEPI SSLPGIYRQS
IDLLLDTADR AQSLGIPALA LFPVTPMSAK SPNAEAAYDP DGLVQRTIRE LKNTFPNLGI
MTDVALDPYT THGQDGLTDA NGYVLNDETT EVLVKQAQSH AAAGADIVAP SDMMDGRIGA
IRQQLEAAGH IHTRIMAYSA KYASSFYGPF RDAVGSAGNL GKADKKTYQM DPANSDEALH
EVAMDLAEGA DMVMVKPGMP YLDIVRRVKT ELKVPTFAYH VSGEYAMLRA AADNGWLDWR
KCLLETMMGF RRAGADGVLT YAALDVAEYL AVGDIQ
|
|---|
| |