Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1164 |
Symbol | |
ID | 8534316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1265564 |
End bp | 1268896 |
Gene Length | 3333 bp |
Protein Length | 1110 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646383553 |
Product | acriflavin resistance protein |
Protein accession | YP_003263047 |
Protein GI | 261855764 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.149808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC TCAAGAACAC GCCCAAAGAG GCATCTGTGC CCAACATCAA CTTGGCCGGC AAACTGGCTC GCACCTTTTT GCACTCCAAG ATCACGGCCT TGATCATGGT CGCGTTGACA TTGTTCGGCC TGATGGCGTT CTTCATTACG CCCAGGTTAT ACAACCCGGA AATCGTGGTG CCCGGTGCGC AGATTCTGGT GCAACGCGTC GGAAACAGCG CGGCACAGAT TCAAGAACAG GTCGTCAAAC CCCTTGAAGC CATTATGGCC AGCATTAAGG GGGTCGATCA CACCTACGGG TATGCCGTAA ATGACATGGG CATCGTTACG GTAGCGTTCA AAGTTGGCAG CGATGAGGAG CGGAGCCTAC TTCTGCTGTA TAACCAACTC TCACGCAATA TGGACAAACT GCCACAAGGC ACGAGTCAAC CGCTGGTCAA GAGCATCGGC ATCACCGACG TTCCAGTCAT GACAGTGACG CTCAGCTCCC CCGATATGAA TGGGGTCGAG CTGCGCGAAC TTGGTCAGCG TGTTCTCGAC CAACTTCAAA GCGTGCCGGA TGTGGGCAAT AGCGGAATTA TTGGCGGGCA TCGCCAGATT CTCTCCGTGA GCGTCAATCC GCAAAAACTC AGCAGTTCCG GCATTGCGCT CAACACCTTG ATCGATTTGC TGAAAGCGTC CAATGTTGTT CTGCCTGCCG GGCATATCGT CAACAACAAC GAGCAGACTA ATTTGCGGGT CAATGCTGCA TTCACTAACG CTCAGGAGCT TGGTGAAATC ATTATTGGCA CGCATGATCA GCGACCGGTT TTTCTACGCG ATGTCGCGGA TATTCGCCTG GCGCCTGAAG AAAACGAACA GTATTCGCAA TTCGGCTACG GGAAAGGCAA TCCGAGAGGT TATGCGATTG GTGGCACCGA TCCTGCGGTT GTCCTGAACA TCGGCAAGCG GGCCGGCGCG AATGCGGTAA CGGTGACCGA GCGCGTTCTG GATAAACTCA AGGTTGTTGA ACAGCAAATG GTGCCGCAGA ACGTGCATGT CACCGTGACG CGTGACTACG GTAAGCGCGC GGACGATGCC GTCAACCTGC TGATGGAACA TCTGATGATC GCCGTTCTGG TGGTGCTCAT CATCCTGTTC TTCTTTCTCG GTTGGAGAGA AGCGCTCATT GTCACACTGA CCGTCCCACT CACCCTGTTC GTTGTACTGG GTGTCGGTTA CGTCATCGGG CAAACCATCA ACCGAATATC GTTGTTTGCG TTGATTCTGT CGCTGGGTTT GTTGGTAGAC GCGGCCATCG TCGTGATCGA GAACATCCAC CGTCACATCC ACGAAGGAAA AGAAAAATCG TTTGCTGACT TGTTGGTGCG CGCGACCAAC GAGATCGGCA ACCCCACCAA CATTGCGACC ATCGCCGTTA TTCTTGCCTT CGTGCCGATG GCCTTTGTTA CCGGCATGAT GGGGCCGTTC ATGCTCCCCA TCCCGATCAA CGTTCCCATT GCGATGGTCG CTTCTCTTAT TCTGGCCTAT ATTGTCGTAC CCTGGACGGC GAACCTGTGG TTGCGTGGCA AAGCACAAAA AGAGATGGCG GCGCATGACG CCCATCCCAA CGAGCCTCAT CGCCCTGACT GGCTGCAACG CGGCTACACC CGTGTGATTC GCCCGCTGCT TGGCAGTCGG GGGCTTTCGT TGTTCTTCCT GATTTTCGTG CTCATTCTTA TGGTGGCTTC CATGTTGATG CCCGCATGGC AATTCATCCG TGCCAGCGGC ATGAATGGCC CCCTGAGTCC TGCGGGCGTC AGCCTCAAAA TGTTGCCCGA AGGGAATGTA AGCACGTTCC TTATTGAAGT GGACACCCCG GCCGGAACCG CACTGGATGA GACCGGTCGT ATCGCCAACA ACGTGACTCA TGTGTTGGCG CAAAGCCAGT ATGTGACAAA CTATCAGACG TTTCTGGGGC GTACTGGGCC ACTCACATTT GCAGGCATGG TTCGAGGCGA CATGATGCGC CAGGGCAGCA ATCTCGCTCA AATCCGCGTT AATCTAGTTC CCTTGCACGA TCGACCGGAT ACCGAAGTGG TGGCCGCTGA CATCTGGCGC GCACTCCAGA AGGTGCGCGA AACTTCTCGT CCCGCCCTGA TCAAGCTATA CCTCACGCCG CCCGGTCCGC CCGTTCGCTC GCAGATATTG GCGCGCATCC ATGGGCCAAA TTACGCCGAA CTTCGTTCAA TCGCCAATCA AGTCAAAGCC AAGTTCAATG ATGTCTACGG CATGATTAAT GTCGATGACA GCATCACTGC GACTGCTGCG GAGTATCTAA TCGAGGTCGA TCGGCAAAAG GCCATGCAGT CTGGCGTCAT GCCCGCTCAA ATCGCCAAAC TGATACACAG TTACGTCGGC GGGGTTACGG TTGGCTCGTT GCATGAATCC AGTTCTGCCG AACCGATCAA CATCGTGCTG CAACTTCCGG TCGCTGATCG TACGTCCATT CAGCAAATAC GCGATTTGAC GATCATCGGT GCCAATGGCA AGCAGGTGCC AATCAGTAGC TTCGTCAATA TCGTGAAATC GAATGTCGCC AAGCCGATTC TTGATCAGGA TCAGCATGAT GTTGTGTATG TTCAGGGTGA TTTGCTTGGT AGCTCACCCG TCTACGCCAC ATTGACTTTG AACAAGTGGC TCGATGACAT GAAGCTAAAC GGCAATGTGA CGTTAACCAC AGCCAACCTC GGTTTTACCG ATGCCCAGCC AGATGATCTC GAAAAATATC AACTGCTGTG GGGCGGTGAC ATGCGCCTGA CCTTGGATGT CTTCCGTGAC CTCGGTGCCG CATTCATCGT TGCATTGATA TTCATCTACC TCTTGCTGGT GGCCTATTAT CAGTCCTTCA TGCTTCCGGT CATTGTCATG GGGGCCATCC CTTTAACACT GGTGGGCATC TTCCCCGGGC ACTGGCTGTT TGACATGCCG TTCAATGCCA CCTCAATGAT CGGTTTTATC GCACTCGCGG GTGTGGTTGT TCGAAACTCA CTCTTGTTGA TCGACTTCAT TCTTGAGTAT CGAAAAGAAG GCTTCGATCT TAAGGAATCG GTGATTACGG CTGGTGCCGT TCGCTTCCGC CCGATTCTCC TGACGGCGTT GGCGATTGTG TTCGGCTCTG CCGTCATGGT GACCGATCCT GTTTTCGGTG GCTTGGCCGT TTCTCTGATC TTCGGAACGC TCGCCTCCAC GTTACTGACA TTGATCGTTA TTCCCATCTT GTATTACTTC TGGCAACTGG ATATGCAGCT AAAAGAACAG AAAAAATCAC AGATTCAGGG TCAATCCACT TAA
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Protein sequence | MSELKNTPKE ASVPNINLAG KLARTFLHSK ITALIMVALT LFGLMAFFIT PRLYNPEIVV PGAQILVQRV GNSAAQIQEQ VVKPLEAIMA SIKGVDHTYG YAVNDMGIVT VAFKVGSDEE RSLLLLYNQL SRNMDKLPQG TSQPLVKSIG ITDVPVMTVT LSSPDMNGVE LRELGQRVLD QLQSVPDVGN SGIIGGHRQI LSVSVNPQKL SSSGIALNTL IDLLKASNVV LPAGHIVNNN EQTNLRVNAA FTNAQELGEI IIGTHDQRPV FLRDVADIRL APEENEQYSQ FGYGKGNPRG YAIGGTDPAV VLNIGKRAGA NAVTVTERVL DKLKVVEQQM VPQNVHVTVT RDYGKRADDA VNLLMEHLMI AVLVVLIILF FFLGWREALI VTLTVPLTLF VVLGVGYVIG QTINRISLFA LILSLGLLVD AAIVVIENIH RHIHEGKEKS FADLLVRATN EIGNPTNIAT IAVILAFVPM AFVTGMMGPF MLPIPINVPI AMVASLILAY IVVPWTANLW LRGKAQKEMA AHDAHPNEPH RPDWLQRGYT RVIRPLLGSR GLSLFFLIFV LILMVASMLM PAWQFIRASG MNGPLSPAGV SLKMLPEGNV STFLIEVDTP AGTALDETGR IANNVTHVLA QSQYVTNYQT FLGRTGPLTF AGMVRGDMMR QGSNLAQIRV NLVPLHDRPD TEVVAADIWR ALQKVRETSR PALIKLYLTP PGPPVRSQIL ARIHGPNYAE LRSIANQVKA KFNDVYGMIN VDDSITATAA EYLIEVDRQK AMQSGVMPAQ IAKLIHSYVG GVTVGSLHES SSAEPINIVL QLPVADRTSI QQIRDLTIIG ANGKQVPISS FVNIVKSNVA KPILDQDQHD VVYVQGDLLG SSPVYATLTL NKWLDDMKLN GNVTLTTANL GFTDAQPDDL EKYQLLWGGD MRLTLDVFRD LGAAFIVALI FIYLLLVAYY QSFMLPVIVM GAIPLTLVGI FPGHWLFDMP FNATSMIGFI ALAGVVVRNS LLLIDFILEY RKEGFDLKES VITAGAVRFR PILLTALAIV FGSAVMVTDP VFGGLAVSLI FGTLASTLLT LIVIPILYYF WQLDMQLKEQ KKSQIQGQST
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