Gene Hneap_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1072 
Symbol 
ID8534219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand+ 
Start bp1160509 
End bp1161174 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content55% 
IMG OID646383456 
ProductCBS domain containing protein 
Protein accessionYP_003262955 
Protein GI261855672 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCA TCGTTTTTGG ACCGGGTATA AGTGACCACC TGACGCTGAA TCAGGCATTG 
TCGCCTTCTG CCATGCCTAG CCAGCCTCAG GCCGTTGTTC CAACGAACAG TACGCGGCGA 
GTTCAGGATA CAGACGAAGA TCATTCAGGT CATGATCCCC GGCGAGAAGA ATTGCAGGGT 
GAGTTGGCAG ATGGCGCTGC GCCTCGAACG TCGGCCATCG GTGCCTACGA GTCGGTGCGG 
CACGCCCAGA AGGAATTGGG CCCCGTACAG TTTGCAGAGC AGATCATGAC ATCGCCCGTA 
TTGAGCCTGA TGCCTGATGC ACCCATCTCT GAATTTCGTG CGCTAATTAC CCGACGAAAA 
ATTGGTTTGG TGCCGCTGAT CGATGCACAA AAAAAGCTCG TCGGCATTGT GACCAAAGGC 
GATTTGACCC GACAACGCGT GCGATTCACG GATCTTGCAC CAAGACCTGT ATCCACCATC 
GGGACACCGA ATGTATTAAC AGCAACGACA AACACCAATA TCCGCGAACT GGCCCGTGTG 
CTGCTCGCGC GGGATATTCG TGGCCTGCCG ATTGTCAATG ATATAGGTGA TGTTGTCGGT 
GTGGTGACGC GAGGCGATAT TCTCCGCGCC CTCGTCAATT ACGCGCCATT GGAACTGTGG 
CTGTAG
 
Protein sequence
MSFIVFGPGI SDHLTLNQAL SPSAMPSQPQ AVVPTNSTRR VQDTDEDHSG HDPRREELQG 
ELADGAAPRT SAIGAYESVR HAQKELGPVQ FAEQIMTSPV LSLMPDAPIS EFRALITRRK 
IGLVPLIDAQ KKLVGIVTKG DLTRQRVRFT DLAPRPVSTI GTPNVLTATT NTNIRELARV 
LLARDIRGLP IVNDIGDVVG VVTRGDILRA LVNYAPLELW L