| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1070 |
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| Symbol | |
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| ID | 8534217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1156817 |
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| End bp | 1158967 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646383454 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003262953 |
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| Protein GI | 261855670 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA ATTTGGATCG ATCATTACGC AACTTTTCCG TTCGATGGAA AAGGTTGTTG
TTACAGATCA TGGTGCTCAC GACGATGGTG TTCGCACCTG CTCATGCAGA TGCCAAAGCG
CCTGTGTCGA CTATAAGCCC AGCCACCAAC CATGCCACCC CTAATGTCAT TACCGATTGG
ACGCCGCAGC CTGCTTTTCT GGCCGGGATG GCGGCCATCG CGCAAGGTGA TTCTGCCGCC
GTGAATGCGG CGATCGCAGC TCTGAAGGAT AATCCGTTGG CGACCTACCT TCGCTTTCGA
TTCCTGCTCG ATCCGCCTAC CTCTGACCCA GCGCCTGTCA TTGCCTTTCT GCAGACGCAC
CCGGATTACG TATTTAGTGC GCAATTGAAA AGTCATACGT TGAATAGCCT GATCAGACAA
CAACAGTTTG CGGACTATCA ACGACTGTTA TCAGTTGCTC CTGAGCTGAA ATCCAATCGA
CGGCTTAGTT GTCAGGGTTG GCAAGCGGCA CTTGAGCTTG GTACGTTGAC GGCTCAGCAG
GTCAAGGATG CTGAACAATT CTGGGCGCAA GGCCGCAACC AGCCATCTTA TTGCGACCCG
ATCTTCAAGT GGTTGCAGGC CCACGACAAA CTGACGCCAA ATCTTTATCG GCAGCGGATT
AAGGCGTCGA TGATTGCGGG CAACCCAAGC TTTGCCTCGT ATTTGGTTCG GGCTGGTACA
TCGCGAAAAA TCGGCGGATT GGATGCCTAT TTCAAGCGTT GGGATGAGGC TTATAAAAGC
CCTCAAAGCA CCTTGCAACA GGCGCTGCAA CGATATCCTT CATATCCCGG TCACGACGAA
CAGGCGTTGC TCATTCAGGC GTTCAAGTGG CTGGGGCGGA GTGATCCTCA AGCCGCGCAT
GATTTGCTTG CGCAGTTGCC TAACTCTTGG CGAATCAATC CGGATGAACA GGCCGAAATA
GCGCGCGTTT TCGCGCTGAA AGCGGCCTAT ACCCGTATGC CGCAAGCGTA TGACTGGCTG
ATGGCTCTAC CCGCATCGGT TCAGGACAAA GAAACCCGCA CATGGACGGC ACGGGTTGCA
TTGCGTGTGC AGGATTGGGC GCGGCTGAAA GTCGCTATTA AAGCCATGCC TGTTGATCTT
TCTCAAACGC CACAGTGGCA GTATTGGCTG GCGCGCGCAG ATGACGAACT TGGCAAGAAT
CAGGAAGCCA AGGCGCGTTG GCAGGCATTG GTGCATACCC CTGATTACTA CGGACTGCTC
GCTGCCGATC GTTTGGGAAT TGCCTATCCG TGGCCGAAAA TCCCTCCGCT GCCAACGATG
GATACCCGTG CTGTGGAAAA GAACCCGATC GTACAACTTG CCTTTTACCT GCATGCAGCG
GGGTTGACGG ATGATGCCCG GCGGGCATTT CTGTCAGCAC TCAAGGAAAT ACCGCCAGAA
CAGATTCCGG CGTTGACCCT GCTTGCCGAG CAATCAAAAT GGCATGATCG AGTATCGATT
GCCATTGCCC GGATGAAAAA ACAGAACGAT CCGCACTGGT TTGCGGCACG ATTTCCGACT
CCTTGGGAAT CGACTGTCGA CGCGCAAGCC AAGGCGCAAG GCATCGCTTC AAATTGGCTG
TATGGAGTGA TTCGGCGCGA AAGCCTGTTC ATGAGCGATG TCGGCTCCGG TGCGGGTGCG
CAAGGATTGA TGCAGCTCAT GCCGAATACC GCACGCTGGA TTAATCACAA GGCCGACCTG
GGTTTGACGA CGATGAACCT GCATGATCCC ACGACCAGTA TCACTCTGGG TGCCGCCTAT
CTCTCCTATC TTAAAGATAA GTTCAACGGT CAACTGCCCT TGGCGATTGC TGCCTATAAC
GCAGGTCCCG GCAGGGTGCG CCAGTGGCTA CCGGAGGATC GGAATCTGCC CGGTGATGTC
TGGGTGGATA CGATTTTGTT CGATGAAACC CGTAATTATG TGCGGGCCGT GCTGTCTTCG
ACCATGATTT ACGCGTGGAG AGAATCGAGC GAGCGTGAGT CGAATAAATC ATCGCAGAAT
ACGGATAATC TGCTTTCACT GCTCACACCC GTTCAGGCAA GTAATCCGAC GACTCTGTCA
TCAGTTAAAC CCGCGGCCAC TGTCGTCGCC GAGCGAGTTG CGGGTAACTG A
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| Protein sequence | MKMNLDRSLR NFSVRWKRLL LQIMVLTTMV FAPAHADAKA PVSTISPATN HATPNVITDW
TPQPAFLAGM AAIAQGDSAA VNAAIAALKD NPLATYLRFR FLLDPPTSDP APVIAFLQTH
PDYVFSAQLK SHTLNSLIRQ QQFADYQRLL SVAPELKSNR RLSCQGWQAA LELGTLTAQQ
VKDAEQFWAQ GRNQPSYCDP IFKWLQAHDK LTPNLYRQRI KASMIAGNPS FASYLVRAGT
SRKIGGLDAY FKRWDEAYKS PQSTLQQALQ RYPSYPGHDE QALLIQAFKW LGRSDPQAAH
DLLAQLPNSW RINPDEQAEI ARVFALKAAY TRMPQAYDWL MALPASVQDK ETRTWTARVA
LRVQDWARLK VAIKAMPVDL SQTPQWQYWL ARADDELGKN QEAKARWQAL VHTPDYYGLL
AADRLGIAYP WPKIPPLPTM DTRAVEKNPI VQLAFYLHAA GLTDDARRAF LSALKEIPPE
QIPALTLLAE QSKWHDRVSI AIARMKKQND PHWFAARFPT PWESTVDAQA KAQGIASNWL
YGVIRRESLF MSDVGSGAGA QGLMQLMPNT ARWINHKADL GLTTMNLHDP TTSITLGAAY
LSYLKDKFNG QLPLAIAAYN AGPGRVRQWL PEDRNLPGDV WVDTILFDET RNYVRAVLSS
TMIYAWRESS ERESNKSSQN TDNLLSLLTP VQASNPTTLS SVKPAATVVA ERVAGN
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