Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0887 |
Symbol | |
ID | 8534028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 957314 |
End bp | 958975 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646383272 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_003262777 |
Protein GI | 261855494 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACC CACTTCTAAT GATGGCTGGC CTTGCAGCGC TGGCTACCGC AACGATGGTT TCAACCGGCG CTTTTGCCGC GGATGCAACC CAAAAATCAA TCAATGTTCC GGCCGTGAGC ATGCTCGTGG TGTTCGTGGT GCTGACTCTG TTCATCACCT GGTGGGCCGC GCAACGCACG CGCACCACCA AGGACTTCTA TGCCGCCGGT GGCAATATCA CAGGCTTTCA GAATGGTCTG GCTCTGGCGG GCGATTACAT GTCTGCCGCC TCGTTTCTCG GGATTGCCGG TCTGGTCTAC GCCAACGGTT TCGATGGCCT GATCTACTCC ATCGGCTTTC TGGTCGGCTG GCCGATCATG CTGTTCCTGC TGGCGGAAAA ACTGCGCAAC CTCGGTAAAT ACACTTTTGC CGATGTCGCC TCCTACCGCC TCTCGCAGAT CCCGATTCGC AGTGTTGCCG CCGTATCATC ATTGATTGTG GTTGCCATGT ACCTCATCGC GCAGATGGTC GGTGCCGGCA AACTGATCGA GATTCTGTTC GGCCTGCCGT ACAACTACGC GGTGGTGATC GTCGGCGTAC TGATGATTCT GTACGTCACC CTGGGCGGCA TGTTGGCGAC GACTTGGGTA CAAATCATCA AGGCGGTACT GCTGCTCTCC GGCGCTACCT TCATGGCGCT GGCCGTGCTG TATGCCTTCG GTTTCGATTT CAACGCAATG TTCGCCAAGG CCATCGAAAT CAGCCCGAAA CACGACGCCA TCATGGCACC CGGCAGCTTG ATCCACGACC CGATCTCCGC CATTTCACTC GGCTTGGCAC TGATGTTCGG TGTGGCTGGC TTGCCGCACA TTCTGATGCG TTTCTTCACC GTAACCAACG CGAAAGAAGC ACGTAAATCC GTGTTTGTCG CCACGGGCTT TATCGGTTAC TTCTATGTGT TGACGTTCAT CATCGGCTTT GGTGCCATCA TCATGGTGTC CACCAATCCC GCCTATCTCG ATGCGGCACA GAAGCTGATC GGTGGCAACA ACATGGCCGC CATCCACTTG TCGCATGCCA TCGGCGGCAA CATCTTCCTG GGCTTCATCT CAGCCGTCGC GTTTGCCACC ATTCTGGCGG TAGTTTCCGG CCTGACCTTG GCCGGCGCCT CAGCGGTATC GCACGATTTG TATGCCAGTG CCTTCCGCCA CGGCCGAGTG GATGAAAAAA CCGAGATGCG CGTTTCCCGC TATGCCACCA TCACCCTGGG TATTCTGGCT ATTTTCCTCG GCATCGCCTT CGAGAAGCAG AACATTGCCT TCATGGTGGG CTTGGCCTTC GCGATTGCCG CCTCGGCCAA CTTCCCGATT TTGTTCCTAG CGATTTACTG GAAGAAGCTG ACGACTCGCG GCGCCGTGAT GGGTGGCCTG GGTGGTCTGT TGACGGCCGT CATCCTGGTT ATTCTCTCCA AGAGCGTATG GGTGGATGTG CTCGGCTACT CTAAAGCGAT CATGCCGTAT GCTTATCCGG CCATCTTCTC GATGCCGGTG GCGTTTGTAT TCGCGTGGTT CTTCTCGATC ACCGACAACA GCACGCGCGC CGTTGAAGAA CGCGCCCGCT TCCACGCTCA ATATGTGCGT TCGGAAACCG GCATCGGTGC AGAAGGTGCT GCAAAGCACT GA
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Protein sequence | MKNPLLMMAG LAALATATMV STGAFAADAT QKSINVPAVS MLVVFVVLTL FITWWAAQRT RTTKDFYAAG GNITGFQNGL ALAGDYMSAA SFLGIAGLVY ANGFDGLIYS IGFLVGWPIM LFLLAEKLRN LGKYTFADVA SYRLSQIPIR SVAAVSSLIV VAMYLIAQMV GAGKLIEILF GLPYNYAVVI VGVLMILYVT LGGMLATTWV QIIKAVLLLS GATFMALAVL YAFGFDFNAM FAKAIEISPK HDAIMAPGSL IHDPISAISL GLALMFGVAG LPHILMRFFT VTNAKEARKS VFVATGFIGY FYVLTFIIGF GAIIMVSTNP AYLDAAQKLI GGNNMAAIHL SHAIGGNIFL GFISAVAFAT ILAVVSGLTL AGASAVSHDL YASAFRHGRV DEKTEMRVSR YATITLGILA IFLGIAFEKQ NIAFMVGLAF AIAASANFPI LFLAIYWKKL TTRGAVMGGL GGLLTAVILV ILSKSVWVDV LGYSKAIMPY AYPAIFSMPV AFVFAWFFSI TDNSTRAVEE RARFHAQYVR SETGIGAEGA AKH
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