Gene Hneap_0825 details

Gene Information

• Locus tag: Hneap_0825
• ID: 8533966
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 896200
• End bp: 896865
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 646383213
• Product: CRISPR-associated protein Cas5 family
• Protein accession: YP_003262718
• Protein GI: 261855435
• TIGRFAM ID: [TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCT ACTGCCTTGA ACTCACTGGC GACTTCGCCT GTTTCACCCG CCCAGAGATG 
AAAGTCGAAC GCGTGAGCTA CGACGTGATA ACGCCTTCTG CCGCACGCGC CTGCTTCGAA 
GCCATACTGT GGAAGCCCGC AATCCGTTGG CATATCCGCA AGATCGAAGT TTTGAAGCCG 
ATCCGCTGGA TCAACCTGCG GCGCAACGAA GTCGCCAGCG TGGTATCCAC GCGTAATGTC 
GAAACCGCGA TGAAAAATGG CATCGGTATT CTCGGCCTCA ACATCGAAGA CGATCGCCAG 
CAGCGCGCCG GACTTTTTCT GCGCGATGTG GCGTATCGCG TCCATGCCGA TCTTGAGGTA 
CTACCCAACG CCGCGCCGGA CAACACCCCA ATGAAGTTTC AGGAAATGTT CGAGCGCCGC 
GCCAAACGTG GGCAATGCGT CAACCAGCCC TATCTCGGCT GTCGTGAATT TGCTGCAAAT 
TTTCGTCTGG TGGCCGACCT CGCCGCCGAA CCTGCCACGA TAGATGAAAC CCGCGAGCTG 
GGCTTCATGC TGCACGACCT GGATTTCACC CACCCTGCCG ACCCCGCGCC ACGCTTCTTT 
CGCGCCCGAC TGGAAAACGG TGTGGTGAAT GTGCCTGCGT GGGATAGCGA GGAGGTACGG 
GGATGA 

 

Protein sequence

MKTYCLELTG DFACFTRPEM KVERVSYDVI TPSAARACFE AILWKPAIRW HIRKIEVLKP 
IRWINLRRNE VASVVSTRNV ETAMKNGIGI LGLNIEDDRQ QRAGLFLRDV AYRVHADLEV 
LPNAAPDNTP MKFQEMFERR AKRGQCVNQP YLGCREFAAN FRLVADLAAE PATIDETREL 
GFMLHDLDFT HPADPAPRFF RARLENGVVN VPAWDSEEVR G