Gene Hneap_0760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0760 
Symbol 
ID8533897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp818055 
End bp818855 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content57% 
IMG OID646383146 
Productprotein of unknown function DUF140 
Protein accessionYP_003262656 
Protein GI261855373 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGAT ACCGAAACGC ATTTTTCAAC GGCTTGGCAC TGCTCGGGCA GGGCGCGCTG 
GCCGCGGTGG CGCATGCCGG GCAAATGATC CTGTTCACCG GGCAATTACT GTGGCGTTTG
TTGCCGGCTT GGACGCGTCC ACGATTGATC GTTCAGGAGT TGTACGCGAT TGGTGTGCTT
TCGTTGGTCA TTATTCTGAT TTCCGGTGGA TTTGTCGGTC TGGTGCTGGG TTTGCAGGGC
TACAATATTC TCTCCAAGTT CAATGCGACC GAATCGCTGG GCGTGATGGT TGCCTTATCG
CTGGTTCGGG AGCTCGGTCC GGTCGTGACG GCTTTGCTGT TTGCCGGTCG TGCCGGATCA
GCCGTGACTG CGGAGATCGC CTTGATGAAA ACCACCGAGC AGCTTTCTGC CATGGAAATG
ATGGCGGTCG ATCCACTGCG TCGGGTCGTG GCCCCACGGT TTTGGGGTGC GGTGTTCTCC
ATGCCTTTGC TTGCCGGGTT GTTCTCTCTG GTGGGTATTG CCGGTGGCTA TTTCATCGGT
GTGGTCGTGC TGGGTGTCGA CCCTGCCTCG TACTGGGGGC AAATCCAGCA GCAGATGCAA
CCCGTGGACG ATGTGCTCAA TGGCGTGATC AAGAGCTTGG TTTTTGGTGC CGTGGTTGGT
TTGATTGCCG TTTTTGAAGG TTTTAATGCA GAACCGACGT CGCTGGGGAT CTCCCGCGCG
ACCACGCGAA CCGTGGTGCT GAGCTCGCTC TGTGTGCTGG GACTGGATTT TATTTTGACC
GCCTGGATGT TTGGGGCCTG A
 
Protein sequence
MNGYRNAFFN GLALLGQGAL AAVAHAGQMI LFTGQLLWRL LPAWTRPRLI VQELYAIGVL 
SLVIILISGG FVGLVLGLQG YNILSKFNAT ESLGVMVALS LVRELGPVVT ALLFAGRAGS
AVTAEIALMK TTEQLSAMEM MAVDPLRRVV APRFWGAVFS MPLLAGLFSL VGIAGGYFIG
VVVLGVDPAS YWGQIQQQMQ PVDDVLNGVI KSLVFGAVVG LIAVFEGFNA EPTSLGISRA
TTRTVVLSSL CVLGLDFILT AWMFGA