Gene Hneap_0517 details

Gene Information

• Locus tag: Hneap_0517
• ID: 8533644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 547722
• End bp: 549737
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646382898
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003262418
• Protein GI: 261855135
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.104858
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTTG GAGTTAAGTT GGGCGGCCTG AGCCGTCAGG TCATCGTGCT GGTCGTGGTC 
GCGGCTATAA CCTTGTTGGT TACCGTCGCG ATTTTTATTC TCTCCGCCAA GAACGACCAG 
ACCCTGTTGG AGCGTCGTCT CGTGGCTTCC CAGCTTGAAC GCTCGTCACA GGAGATGACG 
ATTGAAACTC TGCGCGCCGT TCGCGGTAAC AAGGCTTCTT TCGATACTGT ACTCGCCCTG 
CGCGCCCAGT TTGTCTCCGA TCTGAGTGCA CTCAGTGGCA AAGACCCGAA GCGTCCAGAA 
GCTGGGGTTT CTAATGAGCG TAAGGCCGAG CTTGCCAAGG TTCAGAAGAG TTGGGATGAA 
TACAACGTTG CCTTGGCCAA GGTGCTTGAA GGACAAAAAG CGATCTTGGG CGTAGGCGAT 
CTGGCATCTC AAATCAACCA GCTGCTGCCG GATCTGCTGT CGAGTTCCGA CGAGGTTGTA 
CAAACCCTTA TTGCAGCACA AGCCAGCCCT CAGGTGGTCT ATTTGGCTAC TCGGCAACTC 
ATGTTGGTTG AGCGCATCGG TTTGACCATC GGTGAAATCA CATCGGGCGG ACAGAATGCT 
GCCAATGCCT CAGACCGCTT CGGCCGTGAT GTGGCCTTGT TCGGTGGTGT GTTGAACGGC 
TTCCTGAATG GAAATCGGAT GGCGCCTCAA ATCAACGATG CCGCAGCACG TGCGAAATTG 
CGCGATGTGG CCGTGTTGTT CGCCACCATC AACCAAGGCG GTTCCGATTT GCTCTCCGAG 
GCACCCACTT TGCTGGCAGC TAACCAAGCC GCAATCAAGA TCGACAAGAT TGCCGGGGCA 
TTTACGGGGG ATGTATCCAA ACTTTCTTCT TCCTTGGCGC AAGATCAGGT TAATTCGGGG 
CGACTGGCTT ACATCGGGTA CATGACCGGT TTGATCACGT TGCTGCTTTT GGCATGGCTT 
GGCTACGCGC TGGTACGTGA TTCCAAGCGA GATCAAAAGG CAACTGAGTC TCAAAATCAG 
CGGAACCAGC AAGCCATTTT GCGTCTGCTC GATGAAATGA TGACCCTGGC GGACGGGGAC 
TTGTCCTCGC ATACCACGGT GACAGAAGAG ATTACCGGTG CGATTGCCGA CTCGGTCAAC 
TACTCCATCG ATGCGCTACG TGACCTGGTC GGAACGATCA ACGACACCTC CGTGCGGGTG 
GCAAGTGCTG TACAGCGTTC GCAAGCAAAT TCGCGCGCGT TGGCTGAAAC ATCACGTGCA 
CAAGCGGAAA AGATCAGTTC GGTATCCGAT GCCATCGCGC AAATGTCCGA TCAGATCGAA 
GCGGTATCCT TTAACGCGCA ACAGTCTGCA ACCATCGCGC AGTCTTCGGT TGACGTGGCG 
CACCGTGGTG GTGACGCCGT GCGTGAAACG ATTGCCGGCA TGGTCAACAT TCGTGAACAG 
ATTCAGGAAA CGGCCAAACG GATCAAGCGT CTGGGAGAGT CCTCTCAGGA AATTGGCGAC 
ATCGTTGGCT TGATTACCGA CATTGCCGAC CAAACAAACA TCCTGGCCTT GAATGCTGCG 
ATTCAGGCGG CTATGGCCGG CGAGGCAGGG CGCGGTTTTG CGGTGGTTGC CGATGAGGTT 
CAACGTCTTG CGGAACGCGT CGGTAAGGCG ACACGACAGA TCGAATTGCT GGTTAACACG 
ATTCAAACCG ACACCTCGGA AGCCATGTTG GCGATGGAAC AAACCACGAC CAACGTAGTC 
AGCGGTGCCA CCTTGGCTGA AAACGCAGGT AAGGCACTCC GTGAAATTGA GACTGTTTCA 
CTGAACCTTT CCGAGCAGAT CAGTGAGATT GCGAAGGTCA CCGAACAAGA AGCACTGGTG 
GCTACAAACC TTCGAGAAAC AGTGAATAAC ATTCGAACTG AAACCCAGGA AACAACAGAC 
AAGGCGACGC GTGCAGCGGA TGAAATCGGT GCGCTTGGAT CTCTGTCCAA AGAGCTTAAT 
AACTCGGTGG CGGGCTTCAA GATGCCGGAT CGGTAG 

 

Protein sequence

MSLGVKLGGL SRQVIVLVVV AAITLLVTVA IFILSAKNDQ TLLERRLVAS QLERSSQEMT 
IETLRAVRGN KASFDTVLAL RAQFVSDLSA LSGKDPKRPE AGVSNERKAE LAKVQKSWDE 
YNVALAKVLE GQKAILGVGD LASQINQLLP DLLSSSDEVV QTLIAAQASP QVVYLATRQL 
MLVERIGLTI GEITSGGQNA ANASDRFGRD VALFGGVLNG FLNGNRMAPQ INDAAARAKL 
RDVAVLFATI NQGGSDLLSE APTLLAANQA AIKIDKIAGA FTGDVSKLSS SLAQDQVNSG 
RLAYIGYMTG LITLLLLAWL GYALVRDSKR DQKATESQNQ RNQQAILRLL DEMMTLADGD 
LSSHTTVTEE ITGAIADSVN YSIDALRDLV GTINDTSVRV ASAVQRSQAN SRALAETSRA 
QAEKISSVSD AIAQMSDQIE AVSFNAQQSA TIAQSSVDVA HRGGDAVRET IAGMVNIREQ 
IQETAKRIKR LGESSQEIGD IVGLITDIAD QTNILALNAA IQAAMAGEAG RGFAVVADEV 
QRLAERVGKA TRQIELLVNT IQTDTSEAML AMEQTTTNVV SGATLAENAG KALREIETVS 
LNLSEQISEI AKVTEQEALV ATNLRETVNN IRTETQETTD KATRAADEIG ALGSLSKELN 
NSVAGFKMPD R