Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0463 |
Symbol | |
ID | 8533587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 489265 |
End bp | 490032 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646382843 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_003262366 |
Protein GI | 261855083 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATGGG CAAAATGGGT TAAGTGGGGG GTTGTCGGCA CGATGCTTGT CACCCCTTTG TGGGCGCAGG CTTCTGAAAA GCCAACCGCA AAGCATTCAG CGGTGCCTAT ACCAGAAGCG AAAACCGAAG ATTTGTATGC AGGTAATAGC CTCAACCGCT GGATGCCGAA GGCAGAGCGT GGGGATATTT TCGCGCAATA CGTTCTGGGT CATATGTACT GTGTGGGTCA AGGCGTGCCG AAAGATATGG TCAAGGGCTT GTCCTGGTAT CAGCGCGCGG CTGACCAGGG GTTTGCTCCC GGACAACTGG CCCTGGGCAC CATGTATTAC AACGGCGAAG GCGTGAAGCA GGATTACACG GTGGCGGCCA AGTGGTTCCG CCTCGCCGCC GAGCGTGGCT ATGACCGGGC ACAAAGCAAT CTGGCTGCGA TGTACATGAA TGGCACTGGG GTGCCCCAAG ATTACACGCT GGCCATCAAA TGGTTTCGTG CTGCAGCAAA CCAGGGTTAT GCCACAGCCC AATACACGTT GAGCAGGATG TATTCGGACG GCACGGGTAT GAGCAAGCCG GATATGGTCG CGGCCTATGG GCTGCTTCGT CCACTGGTGG AGAAGGGTAA TGCCGCCGCC GTTACTGCCA TGAAGGAATT GCTGCCGAAA ATGAACCCAG ATCAGATCAA GCAGGGGCAG GAACTCGCCG AGCGGATCCG CGGAAAGAAC CGTTTGAACA AAGCGTTGGA TGCCTACGAG AAAATTGCAT TGCGTTGA
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Protein sequence | MQWAKWVKWG VVGTMLVTPL WAQASEKPTA KHSAVPIPEA KTEDLYAGNS LNRWMPKAER GDIFAQYVLG HMYCVGQGVP KDMVKGLSWY QRAADQGFAP GQLALGTMYY NGEGVKQDYT VAAKWFRLAA ERGYDRAQSN LAAMYMNGTG VPQDYTLAIK WFRAAANQGY ATAQYTLSRM YSDGTGMSKP DMVAAYGLLR PLVEKGNAAA VTAMKELLPK MNPDQIKQGQ ELAERIRGKN RLNKALDAYE KIALR
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