| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0393 |
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| Symbol | |
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| ID | 8533515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 408537 |
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| End bp | 410513 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646382772 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003262297 |
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| Protein GI | 261855014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.305694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG AGCATCCCTC GCGACACGAT CAATTCACAG ACGACCAGCG TTCGCGCCGT
GATTTTCTTC GTTATTTGCT GGCAACAGGC GCTCTGGCAG CCGGAGCGGG CGCGTTCAGT
CGGGTCGGTC ATGCTGCCGG ATTTGCCGAC GCGCTGGGTT ATTCACCCAA GTATCCGGCT
AACTTCAACG CCTTCAATTA TGTGAATCCC GACGCGCCCA AGGGTGGCCG GTTGTCGCTG
TCGGTTTTTG GCAACTTCGA CTCGCTCAAC CCGTTTGTGT TGAAGGGCTT GGCCGCCTCT
GGCCTGAATG AACTGTGTTT TGAAAGTCTG ACCGCGCGCG CCTGGGATGA ACCGTTCTCT
GCCTATGGCT TGTTGGCCGA TCGGGCCGAT CTGGCCGCCG ATGGCTTGTC GATTACTTTT
CGCATCAACG CCAAAGCCCG TTTTTATGAT GGCAGCCCCG TCACGGCGCG GGATGTGCTG
TTCAGCTTCA ATACGCTCAT GAGCAAGCAG GCGCATCCGC GCTATCGGAT TTACTGGGCG
GATATTGCCG GTACGGAGCT GACCGATGCG CGGCATGTTC GATTCAGCTT TAAGCGAGTC
AACCCGGAAC TGCATCTGAT TATTGGTGAA TTGCCGGTTT TTTCCGAACG CTGGCTGGCG
GGGCGTGATT TTGCCAGCCT GTCGCGTGAG GCGTTTTTAA CCAGCGGGCC GTATCGCGTG
GGTCGGGTCG ATTACGGCAA TACAATCACC TATGAGCGCA ACCCCGATTA CTGGGCGAAG
GATCTGGACG TGCGTCGCGG GCAGTTCAAC TTCGACCAAA TCGTGTTCAA ATACTACAAG
GACGAAACCG TCTCGCTCGA AGCCTTTAAG GCGGGCGAAT TTGATGTCTT CTACGAGACC
AACTCCAAGC GCTGGGCACG TGATTACACC GGCGCGAATT TCGATGATGG CCGTATTATT
CGCCGGGAGA TACCGCATAA AAACAACGCA GGGATGCAGG GCTTCGGCAT GAACACCCGC
CAAGCCTTGT TCTCGGATCG GCGCGTGCGG CGGGCGCTGG ATCTGGCGCT GGATTTTGGC
TGGTCGAACA CGCATTTGTT CTACGGTCAG TACACGCGCT GCGACAGTTA TTTCAGTAAC
AGCGAACTGG CTTGTCGCGG ATTGCCGCAA GGCGATGAAT TGGCATTGCT CGAACCCTTC
AAGGCCCAGT TGCCGCCCGA GTTGTTTCGT GAACCCTATC AAGTGCCCGT CGCCAACAAT
CCGGCCGAGC AGCGTGCCAA TTTGCTTAAA GCGCGTGATT TGTTGGCCGA GGCCGGTTGG
CGGGTGGAAG AGGGCGTGCT CAAAAATGCC GAAGGCCAGC CGTTTTCCTT CGAAATCACG
CTGGCCATGC GCGGTTTCGA GCGCATCGTC GCGCCCTATG CCTACAACCT CAAACGGCTC
GGCATCGAAG TCAGTTACCG CACGATTGAT GTATCGCTGT ATCAACGCAA GATGGATCGG
TTTGAATTTG ATATGGCCGT GGTAGCTTAT GGCGAGTCGC AATCGCCGGG CAATGAACTG
CGCGATCGGT TCGGCAGTGC GGCCGCGCAT ACCGACGGTT CCAGCAACTA CATGGGCATT
GATAGCCCTG TGGTGGACGC GCTGATTGAT CGGGTCATCT ACGCCAAGTC GCGGGCGGAA
CTGGTCACGG CCTGTCGCGC GCTGGATCGC GTGCTGCTTT GGGGCGAATA TCTGGTGCCA
AACTGGTACA TTGGTGCGCA TCGGCTGGCG TGGTGGAATC GATTCGGTTT TCACCAGCCG
CTGCCGCTTT ATTTCGATGC CATGACTTGG GTCATGCAAA CATGGTGGCA AGTATATGAA
CATCCGCAAA AACAATCGAA AGGGCACCTC GAAAAACCTA CTGCGCTGTC CGATTGCGTC
GTCGCGTGCT CGTTTACGCG CAGCTGGCTT AAGCCCGCGC CTCGCCTATC TACTTGA
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| Protein sequence | MKNEHPSRHD QFTDDQRSRR DFLRYLLATG ALAAGAGAFS RVGHAAGFAD ALGYSPKYPA
NFNAFNYVNP DAPKGGRLSL SVFGNFDSLN PFVLKGLAAS GLNELCFESL TARAWDEPFS
AYGLLADRAD LAADGLSITF RINAKARFYD GSPVTARDVL FSFNTLMSKQ AHPRYRIYWA
DIAGTELTDA RHVRFSFKRV NPELHLIIGE LPVFSERWLA GRDFASLSRE AFLTSGPYRV
GRVDYGNTIT YERNPDYWAK DLDVRRGQFN FDQIVFKYYK DETVSLEAFK AGEFDVFYET
NSKRWARDYT GANFDDGRII RREIPHKNNA GMQGFGMNTR QALFSDRRVR RALDLALDFG
WSNTHLFYGQ YTRCDSYFSN SELACRGLPQ GDELALLEPF KAQLPPELFR EPYQVPVANN
PAEQRANLLK ARDLLAEAGW RVEEGVLKNA EGQPFSFEIT LAMRGFERIV APYAYNLKRL
GIEVSYRTID VSLYQRKMDR FEFDMAVVAY GESQSPGNEL RDRFGSAAAH TDGSSNYMGI
DSPVVDALID RVIYAKSRAE LVTACRALDR VLLWGEYLVP NWYIGAHRLA WWNRFGFHQP
LPLYFDAMTW VMQTWWQVYE HPQKQSKGHL EKPTALSDCV VACSFTRSWL KPAPRLST
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