| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0357 |
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| Symbol | |
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| ID | 8533477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 360104 |
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| End bp | 362722 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646382740 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003262267 |
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| Protein GI | 261854984 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.160702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA CCACTGCTGA GTTGCGCACT GCTTTCCTGG AATTTTTTAA CCAGCGAGGG
CACGAGATTG TGCCGTCTTC CTCGCTTATT CCTGCTCACG ACCCCACCCT GCTGTTCACG
AATGCCGGTA TGGTCCAGTT CAAGGATGCG TTCCTGGGGC TGGAACATCG GGCGAATCCG
CGCGCTGTCT CTTGTCAACG TTGCGTGCGC GCCGGTGGTA AGCACAACGA TCTCGAAAAT
GTGGGTTATA CCGCGCGGCA TCACACATTC TTCGAGATGC TGGGTAATTT CAGCTTTGGG
GATTACTTCA AGCCCGAGGC TATTCGCTAT GGCTGGGATT TTCTCACTCA AGTATTGAAG
CTGCCTGCCG ATCGCCTGCT CGTGACCGTC TATCAAACCG ATGACGAGGC CTACGCCATT
TGGCGTGATG AAATCGGCTT GCCGGAAGAA AAGGTTCTGC GGATCGGCGA TAAGCCCAGC
GGTGGTTCCG ATAACTTCTG GCAGATGGGT GATACCGGCC CGTGCGGACC ATGCACCGAA
ATTTTCTATG ACCACGGCGC GCACATCCCC GGTGGCCCAC CGGGCTCTGC CGATGAAGAC
GGCGACCGCT TTATCGAAAT CTGGAACATC GTGTTCATGC AATACGATCG GACGGTCGAT
GGTCAGCTTC ATCCCTTGCC GAAACCATCC GTGGATACCG GCATGGGTAT CGAGCGTCTG
GCGGCAATTT TGCAGGGCGG ACACAGTAAT TACGACATCG ATATCTTCCG CCATCTGATT
ACCGCAGCGC AGGCCGTGAC GGGCGCGGCC GACCAGAAGT CGAGTTCCCT CAAAGTCTTG
GCGGATCATA TTCGATCCTG TGCCTTCTTG ATCGTCGATG GCGTTCGTCC CGGCAATGAG
GGGCGTGACT ACGTTCTGCG CCGAATCATC CGCCGGGCCG CGCGTCACGG GCACAAGCTT
GGCGTGGACG AACCGTTTTT CTACCGATTG GTTGCGCCTC TGGTTGAGGT GATGGGGCCG
GCTTATTCCG AATTGGCAAA TGCTCAGGCT GAAGTGGCAC GTGTGCTGCG TCAGGAAGAG
GAGCGGTTCC TGCAGACTCT GGCATCCGGG ATGCAGGTTC TGGAAACCGA ACTGGCCGAT
ATGACGCCGG GGGGCACCAT TCCGGGTGAG GTGGTATTCA AACTCTATGA CACCCACGGT
TTCCCATTCG ATTTGACTGC CGACATTGCC CGCGAACGCG GGCTGGTTCT GGATGAATCC
GGCTTTGAAC ACGCGATGGC CGAGCGGCGG GCGCAATCAC GGGCGGCCAG CCAGTTCGCC
CAGCAAACAC ACGTGCTGGA AATCGAAACA CCGACCTGCT TTGAAGGCTA CGCGCAAGAT
AAGGCGCAGG GCGCACTGAT CGCTATCGTG CACGATGGCG AGCAGATCGA TGTGCTTGAA
GCCGGGCAGT CGGGCGCGCT GGTGCTCGAT CACACGCCTT TTTATGCCGA GTCCGGCGGT
CAGGTAGGCG ACACCGGCGT CATTACCACG GCAGGTGGGC GTTTTGTGGT GACGGATACC
CAGAAGCAGG GTGCGAATTT CCTGCACCTG GGTGAGGTGA TCGAGGGGCG TGTTGCACTC
GGCGACGTGG CTGATGCCCA AATTGATGTC GAACGTCGTC ACAGCATTCG GCTGAATCAC
TCTGCCACGC ATTTGTTGCA CGCCGCGTTG CGTCAGGTGC TTGGCACCCA TGTCCACCAG
AAAGGCTCGC GTGTCGGTGC CGAATCGTTG CGGTTCGATT TTTCTCAATC CGAGCCGATT
ACCGACGCCC AGTTGCGTGA AATCGAACGT ATCGTCAATG CGCAGATTCG CGAGAACCAT
TCGGTTGAAA CGCGTGAAAT GCCCGTCGAC GAAGCGCGTG CGGCCGGTGC TATGGCGCTA
TTCGGTGAAA AATATGGCGA TGTGGTGCGG GTTGTCACCA TGGGGCCATT TTCAATGGAA
CTGTGTGGCG GCACGCATGC GCGTCGCGGC GGCGATATCG GCTTGATCAA GATTGTTAGC
GAAAGCGGTG TGGCCTCGGG TGTTCGCCGG ATCGAGGCAG TCACGGGTGC TTCCGCGCTT
GCCGTGTTGG AACAGACCGA TGACGCCTTG GCCGAAATTG CGAGCATGGT GCGCGGCTCG
CGTCAGGATG CGGTCAGTCG CGTCAGTCAG GTGATCGAAC GAGCGCGGCA ACTCGAGCGA
GAACTGGCCG AAATCAAAGC CAAGCAGGCC GCAGAGGCGG GGGGCGATTT ACTGACCACC
GCCGTGGCAA TGGGCGATGT GAACTATCTG GTTGCCGAGT TGCCTGATGC TGATGTCAAT
ACCTTGCGGG ACACGGTGGA TCAACTCAAG AACAAGTTGG GTACTTCCGC CGTAATGCTG
GCGAGCGTCG AGGATGGAAA GGTTCGTCTG ATTGCAGGTG TCAGCAAAGA CCTCACCGGA
CGCATCAAAG CAGGTGACTG GGTCAATGTT GCCGCTCAGA TCGTGGGCGG AAAGGGCGGT
GGGCGCCCGG ACATGGCCCA GGCGGGTGGT CCGGATTCTG CACAATTGCC GGCGGCGATG
GAAGCTGCTC GTGCCTGGAT GAAGAAGCAG TTGAGTTAA
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| Protein sequence | MMKTTAELRT AFLEFFNQRG HEIVPSSSLI PAHDPTLLFT NAGMVQFKDA FLGLEHRANP
RAVSCQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKPEAIRY GWDFLTQVLK
LPADRLLVTV YQTDDEAYAI WRDEIGLPEE KVLRIGDKPS GGSDNFWQMG DTGPCGPCTE
IFYDHGAHIP GGPPGSADED GDRFIEIWNI VFMQYDRTVD GQLHPLPKPS VDTGMGIERL
AAILQGGHSN YDIDIFRHLI TAAQAVTGAA DQKSSSLKVL ADHIRSCAFL IVDGVRPGNE
GRDYVLRRII RRAARHGHKL GVDEPFFYRL VAPLVEVMGP AYSELANAQA EVARVLRQEE
ERFLQTLASG MQVLETELAD MTPGGTIPGE VVFKLYDTHG FPFDLTADIA RERGLVLDES
GFEHAMAERR AQSRAASQFA QQTHVLEIET PTCFEGYAQD KAQGALIAIV HDGEQIDVLE
AGQSGALVLD HTPFYAESGG QVGDTGVITT AGGRFVVTDT QKQGANFLHL GEVIEGRVAL
GDVADAQIDV ERRHSIRLNH SATHLLHAAL RQVLGTHVHQ KGSRVGAESL RFDFSQSEPI
TDAQLREIER IVNAQIRENH SVETREMPVD EARAAGAMAL FGEKYGDVVR VVTMGPFSME
LCGGTHARRG GDIGLIKIVS ESGVASGVRR IEAVTGASAL AVLEQTDDAL AEIASMVRGS
RQDAVSRVSQ VIERARQLER ELAEIKAKQA AEAGGDLLTT AVAMGDVNYL VAELPDADVN
TLRDTVDQLK NKLGTSAVML ASVEDGKVRL IAGVSKDLTG RIKAGDWVNV AAQIVGGKGG
GRPDMAQAGG PDSAQLPAAM EAARAWMKKQ LS
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