Gene Hneap_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0309 
Symbol 
ID8533428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp319633 
End bp320823 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content56% 
IMG OID646382691 
Producttranslation elongation factor Tu 
Protein accessionYP_003262219 
Protein GI261854936 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000161177 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG AGAAATTTGA ACGGAACAAA CCGCACGTTA ACGTGGGCAC GATTGGTCAC 
GTTGACCACG GCAAGACCAC ATTGACTGCT GCGATCACGA AAGTGATGGC AGAAGCGCAC
GGTGGTGCGT CACTGGGCTA CGACCAGATT GACAAAGCGC CCGAAGAAAA AGCGCGTGGC
ATCACCATCA ACACCTCACA CGTTGAATAC GAATCCGACG CGCGTCATTA CGCCCACGTC
GATTGCCCAG GCCATGCTGA CTACGTCAAG AACATGATCA CCGGCGCAGC CCAGATGGAC
GGCGCGATCC TCGTCTGTTC AGCCGCTGAT GGCCCCATGC CACAGACCCG TGAGCACATC
CTGCTGTCAC GTCAGGTCGG CGTACCCTAC ATCGTCGTAT TCCTGAACAA AGCCGACATG
GTCGATGATC CAGAGCTCCT CGAACTCGTC GAGATGGAAA TTCGCGACCT ACTGAGCAAG
TACGAATTCC CAGGCGACGA CACCCCGATC GTCACCGGTT CAGCGCTCAA AGCCCTCGAA
GGCGACACCA GCGACATCGG CGTACCTTCT GTAATCAAAC TCGTCAAAGC GATGGACGAC
TACTTCCCAG AGCCAGAGCG TGCCGTCGAC GGTACCTTCC TGATGCCAGT AGAAGACGTA
TTCTCCATCT CCGGTCGCGG TACCGTTGTA ACCGGTCGTA TCGAGCGCGG CATTGTCAAA
GTGGGCGAAG AAGTCGAAAT CGTCGGTATT CGCGACACCA CCAAGACCAC CGTTACCGGT
GTAGAAATGT TCCGCAAACT GCTCGACCAA GGCATGGCTG GCGACAACGT CGGCATCCTT
CTTCGTGGCA CCAAGCGTGA CGACGTCGAG CGTGGTCAGG TACTGTGCAA GCCTGGTTCA
ATCAAGCCGC ACACCAAGTT CGAAGCCGAA GTGTACATTC TGGGTAAAGA TGAAGGTGGT
CGTCATACCC CATTCTTCAA CGGCTACCGT CCCCAGTTCT ACTTCCGTAC CACGGACGTC
ACCGGTTCAT GCGTATTGCC CGAAGGTACC GAAATGGTCA TGCCAGGCGA CAACGTTGCC
ATGACCGTTA GCCTGATTGC CCCGATTGCG ATGGAAGACG GCCTGCGTTT TGCGATTCGT
GAAGGCGGCC GCACAGTCGG CGCCGGTGTT GTCTCTAAAA TCATCGAGTA A
 
Protein sequence
MSKEKFERNK PHVNVGTIGH VDHGKTTLTA AITKVMAEAH GGASLGYDQI DKAPEEKARG 
ITINTSHVEY ESDARHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPY IVVFLNKADM VDDPELLELV EMEIRDLLSK YEFPGDDTPI VTGSALKALE
GDTSDIGVPS VIKLVKAMDD YFPEPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGIVK
VGEEVEIVGI RDTTKTTVTG VEMFRKLLDQ GMAGDNVGIL LRGTKRDDVE RGQVLCKPGS
IKPHTKFEAE VYILGKDEGG RHTPFFNGYR PQFYFRTTDV TGSCVLPEGT EMVMPGDNVA
MTVSLIAPIA MEDGLRFAIR EGGRTVGAGV VSKIIE