Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0309 |
Symbol | |
ID | 8533428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 319633 |
End bp | 320823 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646382691 |
Product | translation elongation factor Tu |
Protein accession | YP_003262219 |
Protein GI | 261854936 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000161177 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAAAG AGAAATTTGA ACGGAACAAA CCGCACGTTA ACGTGGGCAC GATTGGTCAC GTTGACCACG GCAAGACCAC ATTGACTGCT GCGATCACGA AAGTGATGGC AGAAGCGCAC GGTGGTGCGT CACTGGGCTA CGACCAGATT GACAAAGCGC CCGAAGAAAA AGCGCGTGGC ATCACCATCA ACACCTCACA CGTTGAATAC GAATCCGACG CGCGTCATTA CGCCCACGTC GATTGCCCAG GCCATGCTGA CTACGTCAAG AACATGATCA CCGGCGCAGC CCAGATGGAC GGCGCGATCC TCGTCTGTTC AGCCGCTGAT GGCCCCATGC CACAGACCCG TGAGCACATC CTGCTGTCAC GTCAGGTCGG CGTACCCTAC ATCGTCGTAT TCCTGAACAA AGCCGACATG GTCGATGATC CAGAGCTCCT CGAACTCGTC GAGATGGAAA TTCGCGACCT ACTGAGCAAG TACGAATTCC CAGGCGACGA CACCCCGATC GTCACCGGTT CAGCGCTCAA AGCCCTCGAA GGCGACACCA GCGACATCGG CGTACCTTCT GTAATCAAAC TCGTCAAAGC GATGGACGAC TACTTCCCAG AGCCAGAGCG TGCCGTCGAC GGTACCTTCC TGATGCCAGT AGAAGACGTA TTCTCCATCT CCGGTCGCGG TACCGTTGTA ACCGGTCGTA TCGAGCGCGG CATTGTCAAA GTGGGCGAAG AAGTCGAAAT CGTCGGTATT CGCGACACCA CCAAGACCAC CGTTACCGGT GTAGAAATGT TCCGCAAACT GCTCGACCAA GGCATGGCTG GCGACAACGT CGGCATCCTT CTTCGTGGCA CCAAGCGTGA CGACGTCGAG CGTGGTCAGG TACTGTGCAA GCCTGGTTCA ATCAAGCCGC ACACCAAGTT CGAAGCCGAA GTGTACATTC TGGGTAAAGA TGAAGGTGGT CGTCATACCC CATTCTTCAA CGGCTACCGT CCCCAGTTCT ACTTCCGTAC CACGGACGTC ACCGGTTCAT GCGTATTGCC CGAAGGTACC GAAATGGTCA TGCCAGGCGA CAACGTTGCC ATGACCGTTA GCCTGATTGC CCCGATTGCG ATGGAAGACG GCCTGCGTTT TGCGATTCGT GAAGGCGGCC GCACAGTCGG CGCCGGTGTT GTCTCTAAAA TCATCGAGTA A
|
Protein sequence | MSKEKFERNK PHVNVGTIGH VDHGKTTLTA AITKVMAEAH GGASLGYDQI DKAPEEKARG ITINTSHVEY ESDARHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLSRQVGVPY IVVFLNKADM VDDPELLELV EMEIRDLLSK YEFPGDDTPI VTGSALKALE GDTSDIGVPS VIKLVKAMDD YFPEPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGIVK VGEEVEIVGI RDTTKTTVTG VEMFRKLLDQ GMAGDNVGIL LRGTKRDDVE RGQVLCKPGS IKPHTKFEAE VYILGKDEGG RHTPFFNGYR PQFYFRTTDV TGSCVLPEGT EMVMPGDNVA MTVSLIAPIA MEDGLRFAIR EGGRTVGAGV VSKIIE
|
| |