| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0231 |
|---|
| Symbol | |
|---|
| ID | 8533346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 243082 |
|---|
| End bp | 244044 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 646382609 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_003262141 |
|---|
| Protein GI | 261854858 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAACC AAGAGCAAGC TTTATCAATT CACCCCCTTT TTTCCAAAGG GGACATCTTT
TCCAGCGGAG TGATACTAAT TCCTGTCAAA ATAAAACAAA ATTCAGTACG CGTGATGCAA
AAATTGTCAT TTTTTGCCAT CTTTTACGGC ACGGCGCTTA TCCACGCCCA GTACAGTAAT
TTCATCATCA CCGCGCTTCT GATGGATCAT CCGTTCAGAA AAATACCGTA TGCTTCACCC
ATGCCTTCTA CCAAAAAATC CCGACGACCC ATCCGGCGGC TGATCTTCCT GCTCTTCGCA
CTGGCGCTCT TAGTCTTTGT CTTGGTGCAA GCGTGGTTTT ATGTGCAGGT CTGGCAGCTA
CGCACGCACA ACCCGCAAAC CACGGCGTTT ATGCGGGAAC GGCTGGCCTT GATTCAAGCG
GTAAATCCCA AAGCAAAACT GGATTATCAC TGGGTAAATT ACGCCGCCAT TGCGCCCATT
GCCAAGCGGG CGGTGGTTGC TTCGGAAGAT GATCGCTTTA TGGAACACTA CGGGTTTGAT
TGGACCGGCA TTCAGGATGC CTTCGAGAAA AATCTGGCCG AGGGCGAGTT TGCGGCAGGC
GGCTCCACCA TCAGCCAGCA ATTGGCGCGC AATCTGTTTC TCTCGCCCAG CAAGAATCTC
TGGCGCAAGG GCGAGGAGGC CATCATTACC TTGATGCTGG AAACCACGCT GGGCAAGCGG
CGCATTCTTG AGCTATATCT CAATGTCGTC GAATGGGGTA ATCTTTTGTA CGGCATCGAT
GCGGCCAGCC ACTATTATTT CCATAAATCC CCGGCGGCAC TCACGCCCCA CGAGGCCGCG
TTTTTGGCCG CCATGCTGCC CAATCCGCGG TTTTATCAGG ACAATCCGGG CAGTCGCGGC
CTGCAAAAAC GTATCCGCGC TGTCGAGGGA CGCATGAACT ATTCGCGCAT ACCGCCCCAA
TAG
|
|---|
| Protein sequence | MQNQEQALSI HPLFSKGDIF SSGVILIPVK IKQNSVRVMQ KLSFFAIFYG TALIHAQYSN
FIITALLMDH PFRKIPYASP MPSTKKSRRP IRRLIFLLFA LALLVFVLVQ AWFYVQVWQL
RTHNPQTTAF MRERLALIQA VNPKAKLDYH WVNYAAIAPI AKRAVVASED DRFMEHYGFD
WTGIQDAFEK NLAEGEFAAG GSTISQQLAR NLFLSPSKNL WRKGEEAIIT LMLETTLGKR
RILELYLNVV EWGNLLYGID AASHYYFHKS PAALTPHEAA FLAAMLPNPR FYQDNPGSRG
LQKRIRAVEG RMNYSRIPPQ
|
|---|
| |