| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0224 |
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| Symbol | |
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| ID | 8533339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 234504 |
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| End bp | 235751 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646382602 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | YP_003262134 |
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| Protein GI | 261854851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0374875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCGAT CTTTTGAATG GCTCATCGGC TTGCGGTACA CCCGCGCCAA GCGGCGTAAC
CGGTTTGTCT CCTTCATATC GGCCACGTCG ATCATCGGCA TCACGCTGGG GGTGACGGCG
CTGATCGTGG TGATCTCGGT GATGAACGGG TTTCAGGATG AATTGCGGCA CCGTATTCTC
GGCATGACGG CGCACGCCAC CATCAGCGAG AACGGTCAGG CTTTGCAGGA CTGGCGTTCA
CTTGCGAAAA AGGTCCAGAA CGAGCCGGAT GTGATGGCGT CAGCACCCTA CGTTCAGGCC
GAAGCGATGC TCTCGGCCCA ACCGAATGTC TCCGGGGCGA TCATCCGCGG CATCGAGCCG
AAGTATGAGG ACGCGGTGAC CGACATTGGC AAGCACATGG TCGCCGGTTC GTTGAGTGAT
CTCAAACCGG GAGGATTCGG CATTGTGCTT GGTGAGGCGC TGGCCCAAAG CCTTGGCGTG
GCGGTGGGCG ACAAGCTCAT GCTCATCACC GCCAATGTCG CGGTCACGCC CGTGGGTGGC
TTGTTGCGTC AGCGGCAGTT TACCGTGGTC GGCATCTTCA AGGTCGGTAT GTACGAATAT
GACCGCGGTT CGGCATTCAT CGATCTCAAG GATGCGCAGG CCCTATTTCG AATGGGCGAT
GGTGTGACCG GTTTGCGGCT GAAACTCGAT GACATGTTCC GCGCGCCTTG GGTTGCGCGC
GATTTGAACC TCAAGCTCGG CAACCCGTAC TGGACGACCG ACTGGACGCA GGCGAACGGC
AATTTCTTCC GCGCGGTACA GACCGAACGC ACCGTCATGT TCATCATTCT TTCACTGATT
GTCGCCGTCG CGGCGTTCAA CATCGTATCC ACCCTGGTGA TGGTGGTAAC GGACAAGCGC
GGTGACATTG CGATTTTGCG CACGCTCGGC GCAAGCCCCG GCAGCATCAT GCGTATTTTC
TTGATTTCCG GCACCGTAAT CGGTCTGATT GGTACGCTGA TTGGCGTGGG TTTCGGGGTG
CTGATCGCGT CGAATGTCGA AACCATCGTG CCGTGGATTG AGCACCTTAC CGGTACCCAG
TTCATGCCCG CCGACGTGTA CTACATCAGC GAAGTGCCTT CCCGATTGGA TTGGAACGAC
GTGTGGCACG TCGGCTTGAT GGCCTTCGGG TTGTCCTTCC TCGCCACGAT TTATCCTGCC
TGGAGCGCCT CACGCGTGCA ACCAGCCGAG GCTTTGCGTT ATGAATAA
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| Protein sequence | MFRSFEWLIG LRYTRAKRRN RFVSFISATS IIGITLGVTA LIVVISVMNG FQDELRHRIL
GMTAHATISE NGQALQDWRS LAKKVQNEPD VMASAPYVQA EAMLSAQPNV SGAIIRGIEP
KYEDAVTDIG KHMVAGSLSD LKPGGFGIVL GEALAQSLGV AVGDKLMLIT ANVAVTPVGG
LLRQRQFTVV GIFKVGMYEY DRGSAFIDLK DAQALFRMGD GVTGLRLKLD DMFRAPWVAR
DLNLKLGNPY WTTDWTQANG NFFRAVQTER TVMFIILSLI VAVAAFNIVS TLVMVVTDKR
GDIAILRTLG ASPGSIMRIF LISGTVIGLI GTLIGVGFGV LIASNVETIV PWIEHLTGTQ
FMPADVYYIS EVPSRLDWND VWHVGLMAFG LSFLATIYPA WSASRVQPAE ALRYE
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