| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0206 |
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| Symbol | |
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| ID | 8533321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 210549 |
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| End bp | 211913 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646382584 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003262116 |
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| Protein GI | 261854833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00461371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTCC TCATCAAATC CACACAGCCT GCCAAAAGCG GCGTTTCATT CGCACCGTCC
ATTCCGCCAG GGAGAAAGGG TTTGGGCTTG GCTCTGATCA TCAATTTGAG TTTAACGCTA
CTGAGCGGCA CTGCTTGGGC TGCCGCGCCA CCCCAAACCG AGCCCGCTCA GAAGACCTGG
GCACAACTAA TCAATCAAAC CGAACAGCGC ATAGAGCAGA ATCTGGTGAC CGAGGCGGAC
AGAGTTCGAT TCGAGTCGGA ACAGGCACGG GCAAATGGCA TTCTGGCAGG CGCTCCGGTT
GTCGATGGCT TGTACCGCAG CGATCGCCTC ATGAGTGATT TCGGTGCCAA TGAAATGGAA
ATAGGTGTCC GCCTGCCACT GCGCCGCTTT GGGCAGTCTG ATGCATGGCG CGCCCTTGCC
GAGCAGTCCG CGCTCAGCGC CAAGACACGC ACCGAAGCCA ATCGCCTCAT CCTGCTTGGC
GATTTGCGCC AGATGGCTTG GGATTGGCGC CGTGCAGAAG TCGAACTATC CACAGCCAAG
GAACGCAACC GGATCATGCA GCGCGACCTC GCTGCTGTCA CAAAGCAGCT CAAGCATGGC
GAAGCGGCCG AAGTCGACCG GATGAGCGTT GAAAGCCGAG CGCTGGCTGT GCAGGAGGCA
GTTACGGCCG CACAGATGCA ACTGGACACC ATCCAGACCC GTTGGCAACA GTTGACCGGC
ACTAGCCAAC TCCCGCTCGA TCTGGGGCAA GTCACCCCGA CTGAACAGGC CCTGTTGAAC
AATCCCGAAC TGAACACGCC TGACGGCCTG CTCGCACAGC AGCCACTGCT GCGCCAGATG
GCGAGCGAAG TCGGCATGAG CACGGCCCGC ATCGAAGCTG AACGCGCGGC AGGCGCTGGC
ACCCCCGAAA TCGGCTTGGG CGTTAAGCGA GATCGCGGCG ACCGCGGCGT ACCTTATGAC
AACAGTCTGC AACTGACCTT GAGCATTCCG TTCGGCGGTC AGAAATACCG CGACCCAGCC
CTAGCCGAGA TGGCGCAGCA GCGAGCCACG GCTCAGGTCG CGCTGATCAA GAACACCCAG
CAGATACTTG GCGAAGTCAT GGCGCTGCGC CAACGCATTG CCGCCTGGCC TTCACGCCTG
ACACAACTCG ACCGCCGTGC CGCGCTGTCA GAAAAGACCT TAACGCTCAA ACAAAAGGCA
CTTCGACTGG GCGAGCTCGA CTGGACGCGC TTGCTCGATT TTGAGCGCGA AGCCGCCGAT
GCCCGCCTGC AAGCCCGCCT GGCGCATATC GCCTATCAGG CAGACCAGAG CAGCCTGAAA
CAAACATTGG GCTTGATGCC CGCCGCAAAC CGGGATTCTC AATGA
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| Protein sequence | MSFLIKSTQP AKSGVSFAPS IPPGRKGLGL ALIINLSLTL LSGTAWAAAP PQTEPAQKTW
AQLINQTEQR IEQNLVTEAD RVRFESEQAR ANGILAGAPV VDGLYRSDRL MSDFGANEME
IGVRLPLRRF GQSDAWRALA EQSALSAKTR TEANRLILLG DLRQMAWDWR RAEVELSTAK
ERNRIMQRDL AAVTKQLKHG EAAEVDRMSV ESRALAVQEA VTAAQMQLDT IQTRWQQLTG
TSQLPLDLGQ VTPTEQALLN NPELNTPDGL LAQQPLLRQM ASEVGMSTAR IEAERAAGAG
TPEIGLGVKR DRGDRGVPYD NSLQLTLSIP FGGQKYRDPA LAEMAQQRAT AQVALIKNTQ
QILGEVMALR QRIAAWPSRL TQLDRRAALS EKTLTLKQKA LRLGELDWTR LLDFEREAAD
ARLQARLAHI AYQADQSSLK QTLGLMPAAN RDSQ
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