Gene Hneap_0167 details

Gene Information

• Locus tag: Hneap_0167
• ID: 8533282
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 169850
• End bp: 171724
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 646382545
• Product: ABC transporter related protein
• Protein accession: YP_003262077
• Protein GI: 261854794
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.692888
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCAAC TTCAATCCGT CAGCCTGCGG CGCGGCACCC AGTTATTACT CGAAAACGCG 
AATTTGACGC TTCAGCCCGG CTATCGCCTG GGTTTGGTGG GGCGTAATGG CACGGGCAAG 
TCGAGCCTGC TGGCGCTGTT GGAAGGCAAG CTCACGCCCG ATGCGGGGAA TGTGGATCGG 
GCCGGTGGGC AACGCTTGGC CACGGTGGCG CAGGAAATGG ATGATCTGGA CGTGAGTGCC 
GTGGAAAGCG TGCTGGCGGG AGATGTCGAA TACGATCGAA TTTCGAAAGC GATTGCCACA 
GCCGAGCTGG CCGAAGACGG TATGGCGCTC GCCACGCTGT ATCACGATCT TGAGGCGATT 
GATGGCTTTA CAGCCCGATC GCGCGCGGCG CGGTTGCTCG ATGGTTTGGG TTTTGCGCCT 
GATGCCATCG ACCGCCCCGT GCGGTCGTTT TCCGGTGGTT GGCGGATGCG CATCAACCTC 
GCTCGGGCCT TGCTTGCGCC CAGTGACATC CTGCTGCTCG ATGAACCCAC CAACCACTTG 
GATCTGGATG CCGTGTTCTG GCTGGAGCAA TGGTTGATCA ACTATCCCGG CAGTCTGGTG 
GTGGTTTCGC ATGACCGGGA TTTTCTGGAT CAGGTCTGCA CCCACATCGC CCATCTGGAA 
AACAAATCGC TCACGGTGTA CACCAGCAAT TACAGCGGAT TCGAGCAGAT GCGCGCCGAG 
CGCCAAGCGC AAAATGCCGC GCTTTCGGCG AAAATTGAGC GAGAACGCGC CCATTTGACG 
GCATTTGTCG ATCGTTTTCG CGCACAGGCG ACCAAAGCCA AACAGGCGCA AAGTCGCATC 
AAGGCCTTGG CGCGCTTGCC TGTGCTGGCC GCGACCCATG CCGACAGCAC TTTTACCTTT 
AGCTTTCGCC CCGCGCCGAA TTCCCCCGAT CCGCTGTTGA CGATGGAACA CCTCGAACTT 
GGTTACAACG GCAAGGCGTT GCTCAAAAAC ATCGACCTGA CGGTGCGCGC GGGTGATCGT 
ATTGGCTTGT TGGGCGCGAA CGGTGCGGGT AAAACCACCT TGATGCGGGT GTTGGGTGGC 
GCGGAAAAAC CGATGGCCGG TGAGCTCTTT ATTTCGGCAG GCGTTCGCGT GGGGTATTAC 
GCCCAGCATC AACTGGAGCA ACTGGACCCG CGTGATACGC CCATGACGGC GCTCGAGCGC 
ATCGCTGGCC GCGCATCTAC GCAAGAAGTG CGTAATTTCC TCGGCGGGTT CGGTTTTATC 
GGCGACCGTG CGTTTGAAAA CATCGAGCCG TTTTCCGGTG GAGAAAAGGC GCGTCTGGCC 
TTGGCCTTGC TTGTCTGGCA GGCACCGAAT CTGCTTTTGC TCGATGAGCC GACCAACCAC 
CTCGATCTGG AAATGCGCGA GGCATTAGCG GCGGCACTGC AAACATTCGA AGGCGCGTTG 
GTGGTGGTAT CGCATGATCG CAGCCTCATC GAAATGGTTT GCGATAACTT TTGGCGCGTG 
CATGACGGCA AAGTCGGTGT TTTTGATGGT GACCTCGACG ATTACCGCCG TGTGTTGACT 
GATGAGCGTC GAGCCGCGAA CGCACCTGCG AAACCAGCGG AGACGACGAA ACCCAAGAGC 
GAATCGACCT GGCGCCCTGC CACCAAAAAA CCGGCAGGAA AACCGGACAA ACGCACCGAT 
AAGCGCGTTG CGGAGATTGA GCATCGCCTG AGTGCGGTGG TGCTTGCGTT GCAGGCGCTC 
GATACGCAAC TGGCTGATCC GGACTTGTAT GCGGGCCCCG ATGCGACCCG TGCAAATGAG 
CTGACAAGCC AGCGCCAGAC GTTGGCAGAG GAGCACGAAG CATTGGAACT GGAGTGGCTG 
TCGCTCAACG ACTGA 

 

Protein sequence

MIQLQSVSLR RGTQLLLENA NLTLQPGYRL GLVGRNGTGK SSLLALLEGK LTPDAGNVDR 
AGGQRLATVA QEMDDLDVSA VESVLAGDVE YDRISKAIAT AELAEDGMAL ATLYHDLEAI 
DGFTARSRAA RLLDGLGFAP DAIDRPVRSF SGGWRMRINL ARALLAPSDI LLLDEPTNHL 
DLDAVFWLEQ WLINYPGSLV VVSHDRDFLD QVCTHIAHLE NKSLTVYTSN YSGFEQMRAE 
RQAQNAALSA KIERERAHLT AFVDRFRAQA TKAKQAQSRI KALARLPVLA ATHADSTFTF 
SFRPAPNSPD PLLTMEHLEL GYNGKALLKN IDLTVRAGDR IGLLGANGAG KTTLMRVLGG 
AEKPMAGELF ISAGVRVGYY AQHQLEQLDP RDTPMTALER IAGRASTQEV RNFLGGFGFI 
GDRAFENIEP FSGGEKARLA LALLVWQAPN LLLLDEPTNH LDLEMREALA AALQTFEGAL 
VVVSHDRSLI EMVCDNFWRV HDGKVGVFDG DLDDYRRVLT DERRAANAPA KPAETTKPKS 
ESTWRPATKK PAGKPDKRTD KRVAEIEHRL SAVVLALQAL DTQLADPDLY AGPDATRANE 
LTSQRQTLAE EHEALELEWL SLND