Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0165 |
Symbol | |
ID | 8533280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 167318 |
End bp | 167785 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646382544 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003262076 |
Protein GI | 261854793 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00375326 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTAG ATCGCTACGA TCGCCAAATC CTGACTTTGC TTCAGGAAAA CGGGCGACTC AGTAATCAGG AGCTGGCCGA TGCTATCGGG CTTTCAGCCT CTCCCTGCCT AAGGCGGGTG CGCGCATTGG AAGAAAGCGG GTTGATTCTG GGGTATCGCG CCCTGCTGGA TGCAAGAAAA CTCGGGCTCA ATCTCGTGGC TCTGTTGCAT ATTTCGATGG ATCAACACAC GCCGGAGCGG TTCGCACACT TCGAGCAACA AGTGGCCCGG CTTCCCGAGG TAATCGAATG CCTGTTGATT ACCGGCCAGA CGGCCGACTA TCAACTCAAG GTGATTGTGA CGGACATGGA TGCCTATCAG ATCCTGCTGC TGAACCAAAT CACGCGGATC GAAGGCGTAA CCGGCGTGCA AACCAGCTTT GTTTTGCGGC GGGTGCTCGA CAAGACTTCA CTGCCCATTC CCGATTGA
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Protein sequence | MTLDRYDRQI LTLLQENGRL SNQELADAIG LSASPCLRRV RALEESGLIL GYRALLDARK LGLNLVALLH ISMDQHTPER FAHFEQQVAR LPEVIECLLI TGQTADYQLK VIVTDMDAYQ ILLLNQITRI EGVTGVQTSF VLRRVLDKTS LPIPD
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