| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0142 |
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| Symbol | |
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| ID | 8533256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 138262 |
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| End bp | 139770 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646382520 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_003262053 |
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| Protein GI | 261854770 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTGG ACGCTGATAC CCACGCCCAT CTGGCCAAAA CGTCGCCGCT GTCGTACGGC
TACGCACGTC GTTTTGGCGT GCTGATCGAG CCGGATACAA CCGCCGAGGC AGCCTGGATC
GTGCGGCATT GCAAGCCGTT GCCGGTATCG GTGTTGGCCG AGCTGGGGCG CAAACTGCCC
GATGGCTTTA CGCTGGACTG GCTTGAAACT GATGAGTTTG AACGCCGCTT GGCGCGCGCC
TATGAAGGCG GTTCGAGCGT GGCACAAACC ATGGTCGATG ATTTGGGCGA CGGCGGGCTC
GATGCGCTGG CCAACACCTT GAACACGCCG ATCGACCTGC TCGAAGCCGA CGACGAAGCA
CCGATCATTC GCCTGATCAA TGCGCTGCTT TCCGAAGCCG TGCGCGAGGG TGCATCCGAT
ATTCATCTGG AAAGCTTCGA AAGCCGCATG GTGGTGCGTT TTCGCGTCGA TGGCATGTTG
CGCGAGGTGC TCGAACCACC GCGTGCCGTG GCCGGTATCA TCGTCTCGCG GATCAAGGTG
ATGGCGAACC TTGATATTGC CGAAAAACGC GTGCCGCAGG ATGGTCGTAT CTCGCTGCGT
TTGGCCGGTC GCCCGGTCGA TGTGCGTGTA TCAACCCTGC CTTCGGGCCA AGGTGAACGC
GTCGTGTTGC GCCTGTTGGA CAAAGAAGCC GGGCGCTTGA CGCTCGATAA CCTGGGGTTA
ACGCGCGAAC TGCAAGCTCG GCTGAACAAG CTCATCCACC GGCCGCACGG CATTTTGCTC
GTGACCGGTC CGACCGGCTC GGGCAAGACC ACCACGCTGT ATGCCGCGCT GTCGGAGATC
AACACCCGCG AGCGCAACAT TCTCACCGTC GAAGACCCGA TTGAGTATTA CCTCGACGGC
GTGGGTCAAA CGCAGGTCAA TCCCAAGGTG GAGATGACCT TCGCGCGCGG TTTACGGGCG
ATTTTGCGCC AAGATCCAGA CGTGGTGATG GTCGGTGAGA TTCGCGATGT CGAAACCGCC
GAAATTGCGG TTCAGGCCAG CTTGACCGGC CACTTGGTGC TCTCGACCTT GCACACCAAC
TCCGCCATTG GCGCGATCAC GCGGCTGCGC GATATGGGTG TTGAACCGTT TTTACTCTCA
TCGAGCCTGA TCGGCGTGCT GGCGCAACGC TTGGTGCGCC GCCTCGATGC CCGTTACCGT
GAAGCCTACA CGCCCGATGC GAGCGAATGC GCGCTGCTCG GCTTGGATGC CAGCCAACCG
CCGACGTTGT ATCGGGTGAG TGAAGAAGCG CGGCAGCGCG GCCAGGGTTA TCTCGGTCGA
ACCGGCGTGT ATGAGCTGAT CAGCATTGAT GCCGACACGC GACGTTTAAT CCACGATGGC
GCCGCGGAAC CGGCCATCGA AGCGCAAGTC CGCAAGCACA GCAGCTCCAT TCTGGCCTAT
GGCGCGGCCC TCGTGATGGC CGGCGTCACC ACCACAGAAG AATTACTCCG CGTGACGGCG
GAAGGGTAA
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| Protein sequence | MTVDADTHAH LAKTSPLSYG YARRFGVLIE PDTTAEAAWI VRHCKPLPVS VLAELGRKLP
DGFTLDWLET DEFERRLARA YEGGSSVAQT MVDDLGDGGL DALANTLNTP IDLLEADDEA
PIIRLINALL SEAVREGASD IHLESFESRM VVRFRVDGML REVLEPPRAV AGIIVSRIKV
MANLDIAEKR VPQDGRISLR LAGRPVDVRV STLPSGQGER VVLRLLDKEA GRLTLDNLGL
TRELQARLNK LIHRPHGILL VTGPTGSGKT TTLYAALSEI NTRERNILTV EDPIEYYLDG
VGQTQVNPKV EMTFARGLRA ILRQDPDVVM VGEIRDVETA EIAVQASLTG HLVLSTLHTN
SAIGAITRLR DMGVEPFLLS SSLIGVLAQR LVRRLDARYR EAYTPDASEC ALLGLDASQP
PTLYRVSEEA RQRGQGYLGR TGVYELISID ADTRRLIHDG AAEPAIEAQV RKHSSSILAY
GAALVMAGVT TTEELLRVTA EG
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