Gene Hneap_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0121 
Symbol 
ID8533235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp111734 
End bp112534 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID646382499 
Producthypothetical protein 
Protein accessionYP_003262032 
Protein GI261854749 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCG AAACCCTCTC TGCAATTGAT CTAGGTCTGG CGGCCCTGCT GGTGGTGGCA 
TTGGGCGTGG TCCAGTTCTT GATGGGCCTC GGTTTGCAGC GCTCGCTCGT GATCGGGACG
GTTCGGATGA CGCTCCAACT GTTATTGGTC GGACTGGTGC TCAAGACCCT GTTTGAATCT
GCTCATCTCG TTTGGATCGG GCTGATGGCT CTAGTCATGC TGGCGCTGGC CGGTTACGAA
GTGAGCGCGC GCCAGAAACG GCCGATCAAG GGCTGGCGAG GGTACGTTAT TGGCTTGTTA
TCGATGGGCG TGACGGCAGC AATCATCACA CTGCTGGCAC TGATCGTCAT CATCTCGCCC
CAGCCGTGGT ACACACCGCA GTACGCCATA CCGCTGCTGG GCATGATTCT GGGCAATACA
ATGACAGGGA TTGGCCTGGC GTTGAATCAT CTGACACAAA CCGCATGGTC CAACAAGAGT
CGAATCGAGG CCCGTCTGCT ACTGGGACAA ACCGCGACAC AGGCCATGGC CGACCTGCGC
ACCGAGGCGC TGCGTGCGGG CCTGATTCCC ACCCTGAACA TGCTGGCCGC CGCCGGACTG
ATCAGCCTGC CGGGCATGAT GACCGGCCAG ATTCTGGCGG GTGCGCCACC AATGGAAGCA
GTGCGTTACC AGATTTTGAT CATGCTGCTG ATCACTGCGG CAACCGGATT CGGTTCGTTG
CTGGCCGTGC ATCTCGGCGC CAGGCGACTG TTCGATGATC GCCAGCGCCT GCGGCTTGAA
CGGTTGGGGC AGCGTAGCTG A
 
Protein sequence
MNIETLSAID LGLAALLVVA LGVVQFLMGL GLQRSLVIGT VRMTLQLLLV GLVLKTLFES 
AHLVWIGLMA LVMLALAGYE VSARQKRPIK GWRGYVIGLL SMGVTAAIIT LLALIVIISP
QPWYTPQYAI PLLGMILGNT MTGIGLALNH LTQTAWSNKS RIEARLLLGQ TATQAMADLR
TEALRAGLIP TLNMLAAAGL ISLPGMMTGQ ILAGAPPMEA VRYQILIMLL ITAATGFGSL
LAVHLGARRL FDDRQRLRLE RLGQRS