Gene Hneap_0088 details

Gene Information

• Locus tag: Hneap_0088
• ID: 8533201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 85475
• End bp: 86020
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646382466
• Product: putative yfeABCD locus regulator
• Protein accession: YP_003262000
• Protein GI: 261854717

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.936462
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATACG ACGAAGCAAA AAAGAAGATT CTTATAAAGT GGCTAGTTGG TGCGCCTGTT 
GTTGTCGCCA CCTCTTTGTC CAGTGCCGTT TCAGCACTGA AAATGTTTTA CTTCGGGCTA 
GATAGTGGAG ATCAACTAAG TAGCGCGATT GCACTGCCAA TTAAGCGATT GGTCTACCTT 
ATCTACGAAA ACACGTTCTT TCTAGGGTTT TTCTGGAAAC ACTCTCCGAC CCCAACACCG 
AAAGAACTTT TCGCAACCAG TAACATTGCG TTTTTTGTTA TTTATCTCTG CATATTCTTT 
GGAATGGCCT TGGTCGGTTC CGCTCGCTCA TTGTCGGCAC GACTTGCGGA GATTGACAAA 
GAAATTGAAA ACGAATTGAT CCGAGAGTCA GTCAAAGGTA ACGTTCCACG CAGACGGCAA 
GAAATCCAAG AGCAGGTTTC AGTGCCAAAA CCTGGTCGGC TCTCTCAGTT TCACACACTC 
TATTTGGCTC CCATAGTGGC TGGGGTTGTT GTTTTAGTCA TTGCAAAAAT TTCTGGGCTG 
GGATAG 

 

Protein sequence

MTYDEAKKKI LIKWLVGAPV VVATSLSSAV SALKMFYFGL DSGDQLSSAI ALPIKRLVYL 
IYENTFFLGF FWKHSPTPTP KELFATSNIA FFVIYLCIFF GMALVGSARS LSARLAEIDK 
EIENELIRES VKGNVPRRRQ EIQEQVSVPK PGRLSQFHTL YLAPIVAGVV VLVIAKISGL 
G