| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0021 |
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| Symbol | |
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| ID | 8533134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 25490 |
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| End bp | 26074 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646382400 |
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| Product | putative type-4 fimbrial pilin related signal peptide protein |
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| Protein accession | YP_003261934 |
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| Protein GI | 261854651 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAATC ACTTCACTGA ACCGGGCTTC ACTCCGCCGG ATTCTGCTCT CGGATTTACG
GCAATCGAAT TGATGATGAC GCTCATCATC GCCATGATAC TCCTGGCCAT TGCCATCCCG
TCTTTCTCGC GCATGAAAGC GCAAAATCAC CTTGCAACGA CGGCAAATGA TTTTGTTTCG
GCTTTTGGCG CTGCTCGGCA AACAGCGATT GTGAAGGGGC GGCCGGTCAC GCTGTGCGCG
GGTGATCAAT CGGGTTGTTT TGATACTGTG GATTGGTCCA ACGGCTGGCT CGCCTTCGTG
GATGCGGATA AGAGCGGCAC GCTGAATGCG GGTGAACCGG TTGTGTTTAC CGGTGTGGCG
CGACGCGGGG ATGTGGTTGT TCAGGGTAAT ACCCCGGTTG AAAAGCCCAT CATCTTTTCT
CCGCTTGGTT TTGCTTCCCA GCCCGGCGGC GCGTTTACGG CAGGAACATT GCGGGTGTGT
GTGCCAGCAG ATATCGCCAA CAACGCACGT GATCTGGTAC TGGCGAAATC TGGACGTTTA
CGTGTGGAAG CAAAGGATTT GAGCGGGGCT TGTCCTGCGC CTTGA
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| Protein sequence | MPNHFTEPGF TPPDSALGFT AIELMMTLII AMILLAIAIP SFSRMKAQNH LATTANDFVS
AFGAARQTAI VKGRPVTLCA GDQSGCFDTV DWSNGWLAFV DADKSGTLNA GEPVVFTGVA
RRGDVVVQGN TPVEKPIIFS PLGFASQPGG AFTAGTLRVC VPADIANNAR DLVLAKSGRL
RVEAKDLSGA CPAP
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