Gene Hneap_0005 details

Gene Information

• Locus tag: Hneap_0005
• ID: 8533118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 6658
• End bp: 7233
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 646382384
• Product: LemA family protein
• Protein accession: YP_003261918
• Protein GI: 261854635
• COG category: [S] Function unknown
• COG ID: [COG1704] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.141685
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGTCA CACTTTCGGT TTTGTTGTTT TTGGTTGCCG TGATCGTGAT CTGGGCGATC 
ATCATGTATA ACGGCCTCGT GGTGCTTAAA CACAACGTCT CACAGGCCTG GTCGAACATT 
GATGTGTTGC TCAAGCAGCG GCACGACGAG CTGCCCAAAC TGGTAGAAAC CGCCAAGCAG 
TACATGAAGT ACGAGCAAGA AACATTGGAG AAAGTTATGC GTGCCCGTTC GGCCGTGCGC 
GGCGCTCAGG ATCGCGGCGA TATCGACGCG CTGGGCATGG CCGAAGGCCA GTTGCGCGCC 
GGGTTGATGG ATTTTTACGC GGTGGCCGAG GCCTATCCCG ATCTCAAGGC CAATACGAGC 
TTCCAGCACC TCCAGCAACG CATCTCCGGT CTGGAGAACA TGATTGCTGA TCGGCGTGAG 
TTCTATAACG CCTCCGTTAA CATCAACAAT GTGCGTATCG AGCAATTCCC CGACGTGCTG 
ATCGCCCAGT TATTCCGTTT TCGTCCGTTC AAGTTGCTCA CCTTTCGCGA AGATGAGCTC 
AAGGATGTCG ATCTCAAGAC GCTGTTTAAT CAATAA 

 

Protein sequence

MGVTLSVLLF LVAVIVIWAI IMYNGLVVLK HNVSQAWSNI DVLLKQRHDE LPKLVETAKQ 
YMKYEQETLE KVMRARSAVR GAQDRGDIDA LGMAEGQLRA GLMDFYAVAE AYPDLKANTS 
FQHLQQRISG LENMIADRRE FYNASVNINN VRIEQFPDVL IAQLFRFRPF KLLTFREDEL 
KDVDLKTLFN Q