| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0004 |
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| Symbol | |
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| ID | 8533117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 4029 |
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| End bp | 6482 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646382383 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_003261917 |
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| Protein GI | 261854634 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.127407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA ACACCCCAAA CGACGCGAGC CAAAACGCTG GCCAAAGCTC TGGTTACGAC
TCAACCAGTA TAAAAGTCCT CAAAGGACTG GATGCCGTTC GTAAGCGCCC AGGCATGTAC
ATCGGCGACA CGGACGACGG CAGCGGCTTG CACCACATGG TGTTCGAAGT GGTGGATAAC
GCGGTCGATG AGGCGTTGGC CGGGCACTGC GATACCGTCA CCGTCACCAT GCATGCCGAT
GGCTCCGTTT CGGTGTCGGA TAATGGCCGT GGCATCCCGG TAGACATCCA TGCCGAAGAA
GGTGTTTCGG CGGCAGAAGT CATCATGACC GTGCTGCACG CGGGCGGTAA GTTCGACCAG
AACAGTTACA AGGTCTCCGG TGGCTTGCAT GGTGTGGGCG TTTCGGTGGT GAATGCGCTT
TCCGACGAGT TGGAGCTGGA CATCTATCGT GGCGGCCATG CGTACCACCA GTCGTACCGT
CTGGGTGTTC CACAAGCGCC GTTGGCCGAA GTGGGCGCTA CGGAGAAATC GGGTACCTCC
ATCCGGTTCC TGCCCAGCCC CACCATTTTC ACGGATGTCG TTTTCCACTA CGACATTCTG
GCAAAGCGTC TGCGTGAACT CTCCTTTCTG AATTCGGGCA TTCGCGTATT TCTGAACGAC
GAGATTTCAG GGCGTGCCGA CACGTTCTAC TACGAAGGCG GCATTCGCGC GTTTGTCGAG
CATCTCAACA AAGGCAAAAC CGTTATCCAC AAGAATGTTC TGAGCTTCTC GGGGCAGAAG
GATTCGGTTC TGGTTGAGTT GGCCTTGCAA TGGAATGATT CGTACCAGGA AAACCTGTTC
TGCTACACCA ATAACATTCC GCAACGCGAT GGCGGCACGC ATTTAACAGG CTTTCGCACG
GCGCTCACGC GGACTTTGAA CGACTACATG GAACGCGCGG GCATTCTTAA AAAAGCCAAG
GTATCCACCT CGGGTGAAGA TTGGCGCGAA GGCTTGGTTG CGGTCATTTC CGTGAAGGTG
CCGGACCCGA AGTTTTCCTC ACAAACCAAA GAAAAGCTGG TGTCATCTGA GGTTAAATCG
GCGGTTGAAT CGCTGACTTC TGAACGACTG GCAGAGTTTC TGGAAGAAAA TCCGCAAGAA
GCCCTGCTCA TTACCAACAA GATCATCGAA GCGGCCCGTG CCCGTGAGGC AGCGCGACGC
GCGCGTGAAA TGACGCGGCG CAAAGGCGCA TTGGATATCG CCGGCTTGCC CGGCAAGCTT
GCCGATTGCC AGGAAAAGGA CCCGGCTCTG TCCGAAATTT ATCTGGTGGA AGGTGACTCG
GCGGGTGGTT CGGCCAAGCA AGGCCGGGAT CGCCGCACAC AGGCGATTTT GCCGCTCAAA
GGTAAAATTC TGAATGTTGA AAAAGCCCGT TTCGACAAAA TGCTCTCGTC GGCTGAAGTC
GGCACCCTGA TCACCGCGCT TGGTTGCGGT ATTGGTCGGG AAGACTTCAA CCCGGACAAA
CTGCGCTACC ACCGCATCAT CATCATGACC GATGCGGACG TGGACGGCAG TCACATCCGC
ACCCTGCTGC TGACGTTCTT CTATCGGCAA ATGAAGGAGC TCGTCGAGCG TGGACACATT
TATATTGCCC AGCCGCCGCT GTATAAGGTT AAAAAAGGTA AGCAGGAGCA GTACCTCAAG
GATGATTTGG CGCTGAACCA GTATCTTCTG CAATTGGCCG TTGATGGTGC CGCGCTCCAA
GTCAACGCGG AAGCGCCGCT TATTTCTGGC CCTGCGCTGG AGTCCATGGC GCGTGAGTAT
CTGGTTGCGC AGGCCGTGAT CGATCGTCTG TCGCATCGGT ACGATCCAGC TGCACTGAAG
GCCGTGTTGC ATTTGCCACC AATGACAGCA GCGGAAATTG TCGAAGATAG CGCGCTATTC
GAAGCCTGGC TTAATCGCTT TACCGAATCC ATGAACCAGT TTGCCGACGC GGGCGTAAAT
TATTCATCCC GGTTTGCGCG CACAGAGGAA GGCCTCGCGG GGATTCAAAT CACGCGAAGT
CAGCACGGTG TTTCACATGA AACATTCTTG CCCGCTGGTT TCTTCTCAAC CGCTGATTAT
CGCGTGTTGG GCGAATTGGC CATCCAGCTT GATGGCTTGA TTGGTGAAGA CGCGCGCGTA
TTGCGTGGCG AGAAGAGCGC GCCGATCACC CATTTCGAGC AAGCTATTGA CTGGCTGATG
CAAGAAGGGC GTCGCGGCCT CGGCATTCAG CGCTACAAAG GTCTGGGCGA GATGAACCCG
GATCAGTTGT GGGAAACCAC GATGAACCCG GAAACCCGTC GGCTGCTGCA AGTGCGCATT
GAAGATGCCA TTGCCTCGGA TGAAATCTTT ACCATTCTCA TGGGCGATCT GGTTGAGCCT
CGTCGTGATT TCATCGAGAA ATTCGCCCTG TCCGCCGTCA ACATCGATAT CTGA
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| Protein sequence | MSDNTPNDAS QNAGQSSGYD STSIKVLKGL DAVRKRPGMY IGDTDDGSGL HHMVFEVVDN
AVDEALAGHC DTVTVTMHAD GSVSVSDNGR GIPVDIHAEE GVSAAEVIMT VLHAGGKFDQ
NSYKVSGGLH GVGVSVVNAL SDELELDIYR GGHAYHQSYR LGVPQAPLAE VGATEKSGTS
IRFLPSPTIF TDVVFHYDIL AKRLRELSFL NSGIRVFLND EISGRADTFY YEGGIRAFVE
HLNKGKTVIH KNVLSFSGQK DSVLVELALQ WNDSYQENLF CYTNNIPQRD GGTHLTGFRT
ALTRTLNDYM ERAGILKKAK VSTSGEDWRE GLVAVISVKV PDPKFSSQTK EKLVSSEVKS
AVESLTSERL AEFLEENPQE ALLITNKIIE AARAREAARR AREMTRRKGA LDIAGLPGKL
ADCQEKDPAL SEIYLVEGDS AGGSAKQGRD RRTQAILPLK GKILNVEKAR FDKMLSSAEV
GTLITALGCG IGREDFNPDK LRYHRIIIMT DADVDGSHIR TLLLTFFYRQ MKELVERGHI
YIAQPPLYKV KKGKQEQYLK DDLALNQYLL QLAVDGAALQ VNAEAPLISG PALESMAREY
LVAQAVIDRL SHRYDPAALK AVLHLPPMTA AEIVEDSALF EAWLNRFTES MNQFADAGVN
YSSRFARTEE GLAGIQITRS QHGVSHETFL PAGFFSTADY RVLGELAIQL DGLIGEDARV
LRGEKSAPIT HFEQAIDWLM QEGRRGLGIQ RYKGLGEMNP DQLWETTMNP ETRRLLQVRI
EDAIASDEIF TILMGDLVEP RRDFIEKFAL SAVNIDI
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