| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0002 |
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| Symbol | |
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| ID | 8533115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1623 |
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| End bp | 2735 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646382381 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_003261915 |
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| Protein GI | 261854632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00017376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTG CCGTTGATCG AGATCGATTC AGCAGTGCCA TCAATCAGGT GATCGGCGGG
GTCGAAAAAC GCCAGACCAT GCAGATTTTG AGCAACCTGT TGCTCGAAGT GGCCGACGGT
CGCCTGACGC TTGTCGCGAC GGATCTGGAA ATCCAATTGC GTACTTCTGT TGACGTTCAG
ATGCAGGCTC CGGGGGCTAC GACCGTCAAT GCCCGTAAAC TGGCAGACAT CGTCAAATCC
GCATCGCAGG ATGCCAAGAT CGCCTTGACG CAAACCGATG GCTGGTTGGA AATCGATATC
GGCACCGGTG TGTTCCGCTT GGCCTCGATC GAGGCAGGAA GCTTCCCGCA AATGACCATC
GATGCCGCGA CGCAATCGAC CGTATCCATC ACCCAAAAGA ATCTCTACGC GCTGATCGAT
AAAACCCAGT TTTCGATGGC GCAGCAGGAT GTGCGGTACT TCCTCAATGG CCTGTTGCTT
GAAGTCAAAC CCGGACAAAT GACGGCGGTC GCCACGGACG GTCATCGTCT GGCTTATGCC
CACCTGAGCG ATGAACGGCT GACGGAGAAC AATCGTCAGG TCATCGTGCC GCGAAAGATG
GTTTCGGAAA TGCTCAAGGC GCTGGATCGC GATAGCGACG ACGAGGTTTC ACTGGCGTTC
CGCGATAACC AGATCGAACT TCTGATCGGT GAAAACTACC TGATCAGCAA ATTGATCGAC
GGCAAATATC CGGATTACTC TCGCGTGATG CCGCAGTCGA ACAGCAAGAT ACTGATCGTG
TCGAAAACGG AACTCAAGCA GGTGTTGCAG CGCGCCAGTA TCTTGTCCAA CGAGCGGTTC
TCGGGGGCAT ATTTTTATCT GAGCCCCGGG CGCTTGATGA TCGAATCAAG CAACGCGGAA
CATGAATCTT CCAAGGAAAC CATGTCCGTT GGATACGATG CGAGCGACCT GAAAATTTCG
TTCAACATCA GCTACCTTCT GAATATTCTG GCGGTTATCG AATCCGAGGA AGTCTGCATG
GAGCTCGAAG CACCCGAGTC CAGCGTGCTG ATCAAACCCG TCATGCCCGG TGACATCGAC
AGCAAATATG TCCTCATGCC TATGAAGCTT TGA
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| Protein sequence | MQFAVDRDRF SSAINQVIGG VEKRQTMQIL SNLLLEVADG RLTLVATDLE IQLRTSVDVQ
MQAPGATTVN ARKLADIVKS ASQDAKIALT QTDGWLEIDI GTGVFRLASI EAGSFPQMTI
DAATQSTVSI TQKNLYALID KTQFSMAQQD VRYFLNGLLL EVKPGQMTAV ATDGHRLAYA
HLSDERLTEN NRQVIVPRKM VSEMLKALDR DSDDEVSLAF RDNQIELLIG ENYLISKLID
GKYPDYSRVM PQSNSKILIV SKTELKQVLQ RASILSNERF SGAYFYLSPG RLMIESSNAE
HESSKETMSV GYDASDLKIS FNISYLLNIL AVIESEEVCM ELEAPESSVL IKPVMPGDID
SKYVLMPMKL
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