Gene Hmuk_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3407 
Symbol 
ID8409485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp209722 
End bp210489 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID645018328 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003175849 
Protein GI257373075 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.351965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.802524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAC GGAACAACTC CGGCGAGATA CAGTCAGTGC AAACGGCCTT CCAGATCCTC 
GAAGAGTTGC GCCGCCGCAA CGAGGCGAGT CTGATGGAGC TGACCGACGC CTTCTCGCTG
TCGAAGAGCA GCATCCACAA CTACCTGAGC ACGCTCGAAG GGGACGGCTA CGTCGTCAAG
GACGGCAGCA CGTACCGGCT CAGTCTCAAA CACCTCGCGC TCGGGGGCAA GGCCCGACAC
AGAGAGCAGA TATACGACAT CGCCCGTGAC GAAGTGACCG ACCTGGCCGA GGAGACCGGC
GAGATGGCGA ACCTCCTCGT CGAGGAGAAC GGCAAGGGGA TCTACATCCA CCGGGATCAC
GGAGCCGACG CCGTCAAGAC CGACTCCTAC GTCGGCCAGC GGGTCAACCT CCACAGCACG
GCGCTGGGTA ACGCGATCCT CGCACACCTC CCCGAGGAAC GCGTCGACGA GATCATCGAG
CAACACGGCC TCCCGGGGAT GACCGAGAAC ACGATCACCG AACGCGACGA ACTGTTCGAG
CGCCTGAAAC GCGTTCGAAC CGAGGGCGTC GCCTTCGACG ACGAAGCCCG CGTCAAGGGC
CTGCGGTGTG TCGCCGTCCC GATCGTGAAC AACGACGACG TCGTCGAGGG CGCGATCAGC
GTCTCCGGAC CGACGAGCCG ACTCCAGGGA GATCGCTTCC GTTCGGAACT CCCTGCGAAG
CTCAAGAGCG TCGCCAACGT CATCGAACTC AACATCACGT ACACGTAG
 
Protein sequence
MPQRNNSGEI QSVQTAFQIL EELRRRNEAS LMELTDAFSL SKSSIHNYLS TLEGDGYVVK 
DGSTYRLSLK HLALGGKARH REQIYDIARD EVTDLAEETG EMANLLVEEN GKGIYIHRDH
GADAVKTDSY VGQRVNLHST ALGNAILAHL PEERVDEIIE QHGLPGMTEN TITERDELFE
RLKRVRTEGV AFDDEARVKG LRCVAVPIVN NDDVVEGAIS VSGPTSRLQG DRFRSELPAK
LKSVANVIEL NITYT