Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3407 |
Symbol | |
ID | 8409485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013201 |
Strand | - |
Start bp | 209722 |
End bp | 210489 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645018328 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003175849 |
Protein GI | 257373075 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.351965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.802524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAC GGAACAACTC CGGCGAGATA CAGTCAGTGC AAACGGCCTT CCAGATCCTC GAAGAGTTGC GCCGCCGCAA CGAGGCGAGT CTGATGGAGC TGACCGACGC CTTCTCGCTG TCGAAGAGCA GCATCCACAA CTACCTGAGC ACGCTCGAAG GGGACGGCTA CGTCGTCAAG GACGGCAGCA CGTACCGGCT CAGTCTCAAA CACCTCGCGC TCGGGGGCAA GGCCCGACAC AGAGAGCAGA TATACGACAT CGCCCGTGAC GAAGTGACCG ACCTGGCCGA GGAGACCGGC GAGATGGCGA ACCTCCTCGT CGAGGAGAAC GGCAAGGGGA TCTACATCCA CCGGGATCAC GGAGCCGACG CCGTCAAGAC CGACTCCTAC GTCGGCCAGC GGGTCAACCT CCACAGCACG GCGCTGGGTA ACGCGATCCT CGCACACCTC CCCGAGGAAC GCGTCGACGA GATCATCGAG CAACACGGCC TCCCGGGGAT GACCGAGAAC ACGATCACCG AACGCGACGA ACTGTTCGAG CGCCTGAAAC GCGTTCGAAC CGAGGGCGTC GCCTTCGACG ACGAAGCCCG CGTCAAGGGC CTGCGGTGTG TCGCCGTCCC GATCGTGAAC AACGACGACG TCGTCGAGGG CGCGATCAGC GTCTCCGGAC CGACGAGCCG ACTCCAGGGA GATCGCTTCC GTTCGGAACT CCCTGCGAAG CTCAAGAGCG TCGCCAACGT CATCGAACTC AACATCACGT ACACGTAG
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Protein sequence | MPQRNNSGEI QSVQTAFQIL EELRRRNEAS LMELTDAFSL SKSSIHNYLS TLEGDGYVVK DGSTYRLSLK HLALGGKARH REQIYDIARD EVTDLAEETG EMANLLVEEN GKGIYIHRDH GADAVKTDSY VGQRVNLHST ALGNAILAHL PEERVDEIIE QHGLPGMTEN TITERDELFE RLKRVRTEGV AFDDEARVKG LRCVAVPIVN NDDVVEGAIS VSGPTSRLQG DRFRSELPAK LKSVANVIEL NITYT
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