Gene Hmuk_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3401 
Symbol 
ID8409479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp204462 
End bp205328 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID645018322 
ProductUspA domain protein 
Protein accessionYP_003175843 
Protein GI257373069 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGACG ACATCCTCGT TCCGACGGAC GGCAGTACCT GTGCAGCGGT CGCGCTCAGC 
GCCGCCGAAG AGGTAGCGAA GCGATACGGA GCGACGATTC ATCTCCTGTC CGTGGCCGAT
TCACGGATCG AGGACCACAC CGTCGGCGAC GAGAGTCAGC ACGCGGCACA CGAGACGATC
GTTCGCGACG CCAGCGAGGA TCTCTCGGCA GAGATCGGCG TCGTAGAAGC AGTCGAGCGG
GGACTGCCAC ACGAGGTGAT CGTAGAGTAC GCCGACGAGG CGTCGGTCGA CCTCGTGGTC
ATGGGCACGC ACGGGCGGAC CGGCGTCCAG CGATACGTGC TGGGCAGCGT CACCGAGAAG
GTGCTCCGGC TGGCCGAGAC GCCCGTGCTC ACGGTCCGGG AAGCGGACGC CGACGAGCGC
CCGACGCCCT TCGAAGACGT GCTGATCCCG ACCGACGGCA GCGACGCCGC GAACGCGGCG
ATCGGTCCGG CCCTCGACAT CGCCGGTGCG TACGACGCCA GCGTCCACGC GCTCTCGGCG
ATAGAGCCGC TGTCGATGGG CGTCGATGTT CGGTCACACG TCATCGTGGA GGCACTCGAA
GAACGGGCCC AGTCGGCCGT CGACGACGTG GCCGAGCGAG CCGCGAACGC GTCGCTCGGA
CCGATCGAAA CCGCCGTCGA GTTCGGCGAT CCGTACCGAC AGATCAGGAC CTACGTCGAG
GAGAACGACA TCGATCTGGT CGTCATGGGC ACCCACGGCC GAAGCGGCGT CGAGCGGTTC
CTGCTGGGCA GTGTCACCGA AAAGCTCGTC CGAACGTCGT CGGCTCCCGT GATGACCGTG
AGACGGCCAG AGAACAGCGG GAGTTAG
 
Protein sequence
MFDDILVPTD GSTCAAVALS AAEEVAKRYG ATIHLLSVAD SRIEDHTVGD ESQHAAHETI 
VRDASEDLSA EIGVVEAVER GLPHEVIVEY ADEASVDLVV MGTHGRTGVQ RYVLGSVTEK
VLRLAETPVL TVREADADER PTPFEDVLIP TDGSDAANAA IGPALDIAGA YDASVHALSA
IEPLSMGVDV RSHVIVEALE ERAQSAVDDV AERAANASLG PIETAVEFGD PYRQIRTYVE
ENDIDLVVMG THGRSGVERF LLGSVTEKLV RTSSAPVMTV RRPENSGS