Gene Hmuk_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3395 
Symbol 
ID8409473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp198486 
End bp199631 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content66% 
IMG OID645018317 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003175838 
Protein GI257373064 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.441617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGATC ACACACGACG CGGGTTCCTG ACCGTGGCGG GCTCGGCGAC GGCCGCCACG 
GTCGCAGGGT GTAGCGGCAC CGAAGCCATC GGCGGCGGTG GCGGCGAGAC CTACGAGGTC
GGCCACGGGG ACTACCAGAC GACCGTCAGC GAGAGCGACT TCCCCTCGGA CAGACTCTAC
ATCTACGCCG TCCAGACGGG GTGGTCGAAC TGGGGTGCCG TCATGGACGC CTTCGACGAG
CGGTACGGCG TCGAGCTGAA CGACGACCAG CGTACCTCCG GCGAGGCGCT CACACACATC
CGATCGAACG CCGAGAACCC CACCCACTCG GCGTACAACG GCGGCTACTC GTTCGGTATC
ACCGCCATGG AGGAGGGGTT CACCACGGAC TACAAGCCGG CCAACTGGGA CGCCGTTCCG
CCGGATCTGA AGACGGACAA CGGCCACCTC ACCGCGACCC GGCAGATGAC GACGGCGGTC
ACCTACCGCA AGGACATCTA CGAGGAGCGC GGGCTGGGCG AGCCCGAGAG CTGGGAGGAC
TTCAAACACC CCGACGCCGC CAAGGACTTC TGTGTGACCC CGCCCCACTC GGCCAACGGG
CTGGCGACGG CGCTGTCGAT CAACAACGCC TACGGCGGGA CGATGGACGA TCTGGGACCG
GTCGTCGAGT ACTACGACGA CATCGCCCAG AAGGGGGCAG ACGTGCGTCG CAACATCACC
GGCGACTTCA CCAGCGGCGA GGTCTCGGCG GTCGCTCAGT ACGACTACAC CGCCCTGGAG
ATGAAGTACA ACCACGAGGA GGTGCCCGCG GAGAACGTCG GCGTCGCGAT CCTGCCCGGC
CCCGAGGGCG ACGCCGGAGC GATGAACATC CCGTACGGCT ACGGCATGCT CGACGGCGCA
CCGAATCCGG AGACGGCGAA GTTGTTCATG GACTTCGTTC TCTCACTGGA GGGCCAGCGG
CTGTTCTTCG ACGCGTTCGT CCGCCCGATC CGGGCCGGCG AGCTGGAGAT GCCAGACGAG
TTCCCCGACC AGACGACCTA CGAGGCGGCG GAGTTCACCG TCGACCAACT GGATCTCGTC
GAGCGACAGG AGTCCATCAT CGATCAGGTG ACCTCGGAGT CGGACATTCC CGGCATCCAG
GGGTAA
 
Protein sequence
MTDHTRRGFL TVAGSATAAT VAGCSGTEAI GGGGGETYEV GHGDYQTTVS ESDFPSDRLY 
IYAVQTGWSN WGAVMDAFDE RYGVELNDDQ RTSGEALTHI RSNAENPTHS AYNGGYSFGI
TAMEEGFTTD YKPANWDAVP PDLKTDNGHL TATRQMTTAV TYRKDIYEER GLGEPESWED
FKHPDAAKDF CVTPPHSANG LATALSINNA YGGTMDDLGP VVEYYDDIAQ KGADVRRNIT
GDFTSGEVSA VAQYDYTALE MKYNHEEVPA ENVGVAILPG PEGDAGAMNI PYGYGMLDGA
PNPETAKLFM DFVLSLEGQR LFFDAFVRPI RAGELEMPDE FPDQTTYEAA EFTVDQLDLV
ERQESIIDQV TSESDIPGIQ G