Gene Hmuk_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3378 
Symbol 
ID8409456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp179954 
End bp181507 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content64% 
IMG OID645018301 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003175822 
Protein GI257373048 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT GGTCGAACAC CTTCGGAGAC GGCGGCCTCA ACGCCCTCCT CGACGTCGAC 
TCGCTCGTCG CCGCGTGTGG CATAGACGAG TCGGAAATCG AGTGGCGAAA GGAGTTCGTC
GGCTTCGACG AGACCGACGA ACAGCACCTC TCGGAGCTCG AAGAGCTGTT TCGGGCCCAC
ACCGACGAGA TCGCAGACGG CTTCTACGAC AACCTGACCG ATCACCAGCA GACCAGCGAC
GTGATCGGTC GGTCGGACAA GTCCCTCCAG CAGCTCAAAG AGACCCAGTC CGCGTATCTC
GTGACCCTCG CCAGCGGAGA GTACGGAATG GACTACTTCC GCGACCGGGC ACGGATCGGC
AAGATCCACG ATCTGCTCGA AATGCCGATG AAACACTACA TCGGTCAGTA CGGCGTCTAC
TACGACCTCA TCTTCCCGCT CCTGTTCGAC CGGATCGAGG AACGGCTCGT CGACCGACTG
ACAGACACAG CGGCTCTCGC GGGCGACGGC GGTCCCCAGG CGGTCGAGGC AGGAACCCGA
GAGTCGGTCG AGGAGATCGT CGGCGAAGAA CTGGATCGCG GCCTCGAAGA GATCCTCGCG
GTGTTGCGGA TCGTCAACCT CGACATGCAG GTCGTCGCCG ACACGTACAT CCACTCCTAC
AGTCAGGAGC TCGAACAGTC GATCGAAGAG CGCGAGCAGC TCATGACGGA TATCGAACAG
GACCTCGCAG ATCCGATTCG GACGCTCCGT GACTCCGCCG AGGACGTCGC CACCAGCACC
GACGAAATCA GCGACATCGC TCGCGAACAG GCAGGGACGA CCGAAACCGT CGGCCGTGAG
ATCAGCAACG TCAGCGCGAC CGTCGAGGAG ATCGCCTCGA CGGCCGACGA GGTCGCGGCC
ACGAGCGAGC GTGCCGAGCG ACTCGCCGAG GACGGGCGGA CCGCCGCCGC CGACGCGATC
GAGGCGATGG AGCGAGTTCA GGAGTCGTCC GGAGACGTCG TCAGCGACGT GGACCGGCTG
GAAGAGCGCG TCGCAGAGAT CGACGAGATC GTGGACATGA TCAACGACAT CTCCGATCAG
ACGAACATGC TGGCGCTGAA CGCCTCCATC GAGGCCGCCC GTGCCGGCGA GGCCGGCGAC
GGCTTCGCCG TCGTCGCAGA CGAGGTCAAG AGCCTCGCCG AGGAATCTCG CACACACGCC
AGCGAGATCG AGGAGATGGT CGAGGAGATC CAGGCCGACA CCGAGAACGC AGTCGCCAGT
CTCGAAGCGA CCGCGCAGGA CGTCGACCGC GGAATCGAGC GGGTCGAATC GGCGACCGAG
ACCCTCCAGG AGATCGTCGA CGTCGTGGCC GAGGCCTCTC GTGGAATCCA CGAGGTCTCG
GACGCGACCG ACGATCAGGC GGCCTCTGCA GAGGCGGTGG CGGGTATGGT GGACGAACTC
GTCGACCAGG CCGACCAGGT CGCCGACGAG GTAGAGGCAG TCGCAGCCGC AAACGAAGAG
CAAACGAAGA CGATCCGCGA GATCAGCGAG ACGGCGGAGC GACTCGGCGA GTGA
 
Protein sequence
MKDWSNTFGD GGLNALLDVD SLVAACGIDE SEIEWRKEFV GFDETDEQHL SELEELFRAH 
TDEIADGFYD NLTDHQQTSD VIGRSDKSLQ QLKETQSAYL VTLASGEYGM DYFRDRARIG
KIHDLLEMPM KHYIGQYGVY YDLIFPLLFD RIEERLVDRL TDTAALAGDG GPQAVEAGTR
ESVEEIVGEE LDRGLEEILA VLRIVNLDMQ VVADTYIHSY SQELEQSIEE REQLMTDIEQ
DLADPIRTLR DSAEDVATST DEISDIAREQ AGTTETVGRE ISNVSATVEE IASTADEVAA
TSERAERLAE DGRTAAADAI EAMERVQESS GDVVSDVDRL EERVAEIDEI VDMINDISDQ
TNMLALNASI EAARAGEAGD GFAVVADEVK SLAEESRTHA SEIEEMVEEI QADTENAVAS
LEATAQDVDR GIERVESATE TLQEIVDVVA EASRGIHEVS DATDDQAASA EAVAGMVDEL
VDQADQVADE VEAVAAANEE QTKTIREISE TAERLGE